Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_0976 |
Symbol | rocD |
ID | 5315881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 1000713 |
End bp | 1001903 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640779063 |
Product | ornithine--oxo-acid transaminase |
Protein accession | YP_001316119 |
Protein GI | 150393444 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases [TIGR01885] ornithine aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAT CTGAAAAAAT TATTGAGTTA ACAAATCATT ACGGAGCACA TAATTATTTA CCATTGCCAA TTGTCATTTC AGAAGCTGAA GGGGTATGGG TTAAAGATCC TGAAGGCAAT AAATATATGG ATATGTTATC TGCATATTCC GCTGTTAACC AAGGTCATAG ACATCCGAAA ATTATTCAAG CATTAAAAGA TCAAGCTGAT AAAGTGACTC TAGTTTCACG TGCTTTTCAT AGTGATAACT TAGGTGAATG GTACGAAAAA ATTTGTAAAC TGGCAGGTAA AGATAAAGCT TTACCAATGA ATACAGGTGC TGAAGCAGTA GAAACAGCTT TGAAAGCAGC ACGACGCTGG GCATACGATG TTAAAGGAAT TGAGCCAAAT AAAGCAGAAA TCATTGCATT TAATGGTAAC TTCCATGGTC GAACAATGGC GCCAGTTTCA TTATCTTCAG AAGCAGAATA CCAACGTGGT TATGGTCCGT TATTAGATGG ATTTAGAAAA GTTGATTTTG GAGATGTAGA TGCATTGGAA GCTGCAATTA ATGAAAATAC TGCAGCAGTT TTAGTAGAAC CAATTCAAGG TGAAGCGGGT ATAAATATAC CGCCAGAAGG ATATTTGAAA GCAATTAGAG AATTATGTGA TGAACATAAT GTCTTATTTA TTGCTGACGA AATCCAAGCA GGATTAGGTC GTTCGGGTAA ATTATTTGCT ACGGATTGGG ATAATGTAAA ACCTGATGTC TATATTTTAG GTAAAGCACT AGGTGGTGGT GTCTTCCCAA TTTCTGTTGT ATTAGCAGAT AAAGAAGTAT TAGATGTCTT TACACCTGGC TCACATGGTT CAACATTTGG TGGTAATCCA CTTGCTTGTG CTGCATCAAT TGCTGCATTA GATGTTATCG TTGATGAGGA TTTACCAGGG CGCTCTTTAG AATTAGGAGA TTATTTTAAA GAACAATTAA AGCAAATTGA TCATCCATCA ATTAAAGAAG TCCGTGGACG TGGTTTGTTT ATAGGTGTGG AACTTAATGA AAGTGCTAGA CCATATTGTG AAGCTTTGAA AGAAGAAGGC TTATTATGTA AAGAAACGCA TGATACTGTC ATTCGTTTTG CACCACCATT AATTATTACT AAAGAAGAAT TGGACCTTGC ACTTGAAAAA ATAAGACATG TATTTCAATA A
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Protein sequence | MTKSEKIIEL TNHYGAHNYL PLPIVISEAE GVWVKDPEGN KYMDMLSAYS AVNQGHRHPK IIQALKDQAD KVTLVSRAFH SDNLGEWYEK ICKLAGKDKA LPMNTGAEAV ETALKAARRW AYDVKGIEPN KAEIIAFNGN FHGRTMAPVS LSSEAEYQRG YGPLLDGFRK VDFGDVDALE AAINENTAAV LVEPIQGEAG INIPPEGYLK AIRELCDEHN VLFIADEIQA GLGRSGKLFA TDWDNVKPDV YILGKALGGG VFPISVVLAD KEVLDVFTPG SHGSTFGGNP LACAASIAAL DVIVDEDLPG RSLELGDYFK EQLKQIDHPS IKEVRGRGLF IGVELNESAR PYCEALKEEG LLCKETHDTV IRFAPPLIIT KEELDLALEK IRHVFQ
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