| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_0799 |
|---|
| Symbol | |
|---|
| ID | 5316148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 854867 |
|---|
| End bp | 856852 |
|---|
| Gene Length | 1986 bp |
|---|
| Protein Length | 661 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640778884 |
|---|
| Product | excinuclease ABC subunit B |
|---|
| Protein accession | YP_001315942 |
|---|
| Protein GI | 150393267 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
|---|
| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAAC ATTATCCTTT TAAAATACAT TCTGATTTTG AGCCTCAAGG TGACCAACCG
CAAGCAATTA AGGAAATCGT GGATGGTATT AAAGCGGGGA AAAGACATCA AACTTTATTA
GGTGCAACTG GCACAGGGAA AACATTTACG ATGAGTAATG TTATTAAAGA AGTTGGGAAA
CCAACGTTAA TTATCGCACA TAACAAAACA TTAGCAGGGC AATTATATAG TGAGTTTAAA
GAATTTTTTC CTGAAAACAG GGTGGAATAC TTTGTAAGTT ACTATGATTA TTATCAACCT
GAGGCATACG TACCGTCTAC TGACACTTTT ATTGAAAAAG ATGCCTCAAT CAATGATGAA
ATTGATCAAC TACGACATTC TGCTACAAGT GCATTATTTG AACGCGATGA TGTAATTATT
ATTGCTAGTG TAAGTTGTAT ATATGGTTTA GGTAATCCTG AAGAATATAA AGATTTAGTA
GTAAGTGTTC GAGTTGGTAT GGAAATGGAT AGAAGTGAAT TACTTAGAAA ACTTGTAGAT
GTGCAATATA CACGAAATGA CATCGATTTC CAACGAGGAA CGTTTCGAGT GCGTGGTGAT
GTAGTTGAAA TATTCCCAGC CTCTAAAGAA GAACTTTGTA TAAGGGTTGA GTTTTTCGGC
GATGAGATTG ACCGTATCCG AGAAGTTAAC TACCTAACAG GTGAAGTGTT GAAAGAAAGA
GAACATTTTG CGATATTCCC AGCTTCTCAC TTCGTAACAC GTGAAGAAAA GTTGAAAGTT
GCGATTGAAC GTATTGAAAA AGAATTGGAA GAACGATTGA AAGAATTACG AGATGAGAAT
AAATTACTAG AAGCGCAAAG GTTAGAACAG CGTACCAACT ATGATTTAGA AATGATGCGA
GAGATGGGAT TCTGTTCAGG AATTGAAAAC TATTCCGTAC ATTTAACTTT GCGACCACTG
GGTTCGACAC CGTATACTTT ATTGGATTAC TTTGGCGATG ATTGGTTAGT AATGATTGAT
GAATCACATG TGACATTACC ACAAGTTCGA GGCATGTATA ACGGAGACAG AGCGCGTAAA
CAAGTTTTGG TGGATCATGG ATTTAGATTA CCGAGTGCAT TAGATAACCG TCCACTTAAA
TTTGAAGAAT TTGAAGAAAA GACAAAACAA CTTGTGTATG TATCTGCAAC GCCTGGACCA
TACGAAATTG AACATACGGA TAAGATGGTT GAACAAATTA TTCGTCCTAC TGGTTTACTG
GATCCTAAAA TTGAGGTTAG ACCTACTGAA AATCAAATTG ACGATTTATT AAGTGAAATT
CAAACAAGGG TTGAGCGTAA TGAACGCGTA CTTGTTACAA CGCTCACTAA AAAGATGAGT
GAAGATTTAA CCACATACAT GAAAGAAGCG GGTATTAAAG TTAATTATCT GCATTCAGAA
ATCAAGACAT TAGAACGAAT CGAAATAATT AGAGACTTAC GAATGGGTAC ATATGATGTT
ATCGTAGGTA TTAATTTATT AAGAGAGGGT ATTGATATAC CAGAAGTTTC TCTAGTTGTC
ATATTAGATG CAGATAAAGA AGGATTTTTA CGTTCTAACC GCTCATTAAT TCAAACAATA
GGTAGAGCTG CGCGTAACGA TAAAGGTGAA GTCATTATGT ATGCCGATAA AATGACTGAT
TCGATGAAGT ATGCAATTGA TGAGACACAA CGTCGTCGAG AAATACAGAT GAAACATAAT
GAAAAACATG GTATTACACC TAAAACAATT AATAAAAAAA TACATGATTT AATTAGTGCT
ACTGTTGAAA ATGACGAAAA TAATGACAAA GCACAAACTG TGATACCTAA GAAGATGACG
AAAAAAGAAC GTCAAAAGAC AATCGACAAT ATAGAAAAAG AAATGAAACA AGCAGCGAAA
GATTTAGATT TCGAGAAAGC TACAGAATTA AGAGATATGT TATTTGAATT AAAAGCAGAA
GGGTGA
|
|---|
| Protein sequence | MVEHYPFKIH SDFEPQGDQP QAIKEIVDGI KAGKRHQTLL GATGTGKTFT MSNVIKEVGK
PTLIIAHNKT LAGQLYSEFK EFFPENRVEY FVSYYDYYQP EAYVPSTDTF IEKDASINDE
IDQLRHSATS ALFERDDVII IASVSCIYGL GNPEEYKDLV VSVRVGMEMD RSELLRKLVD
VQYTRNDIDF QRGTFRVRGD VVEIFPASKE ELCIRVEFFG DEIDRIREVN YLTGEVLKER
EHFAIFPASH FVTREEKLKV AIERIEKELE ERLKELRDEN KLLEAQRLEQ RTNYDLEMMR
EMGFCSGIEN YSVHLTLRPL GSTPYTLLDY FGDDWLVMID ESHVTLPQVR GMYNGDRARK
QVLVDHGFRL PSALDNRPLK FEEFEEKTKQ LVYVSATPGP YEIEHTDKMV EQIIRPTGLL
DPKIEVRPTE NQIDDLLSEI QTRVERNERV LVTTLTKKMS EDLTTYMKEA GIKVNYLHSE
IKTLERIEII RDLRMGTYDV IVGINLLREG IDIPEVSLVV ILDADKEGFL RSNRSLIQTI
GRAARNDKGE VIMYADKMTD SMKYAIDETQ RRREIQMKHN EKHGITPKTI NKKIHDLISA
TVENDENNDK AQTVIPKKMT KKERQKTIDN IEKEMKQAAK DLDFEKATEL RDMLFELKAE
G
|
|---|
| |