| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_0196 |
|---|
| Symbol | |
|---|
| ID | 5317495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | - |
|---|
| Start bp | 227197 |
|---|
| End bp | 228789 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640778266 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001315345 |
|---|
| Protein GI | 150392670 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAATT TATTAGAAGT CAACAGTCTG AATGTACAAT TCAATTATGA TGAAACTACA
GTTCAAGCGG TAAAAAATGT CTCTTTCGAA TTACGAAAAA AACATATCCT AGGTATTGTT
GGTGAATCAG GATCAGGAAA AAGTATTACT GCTAAATCTA TTTTAGGGCT ACTACCAGAT
TATCCAGATC ACACATTAAC AGGAGAAATT ATTTTTAATG GGCAATCGTT AAATAATTTA
TCAACTTCAG CGTTACAACA AATTCGAGGT AAGGATATTT CAATGATTTT TCAAGATCCA
CTCTCTTCGT TGAATCCAAG ATTAACGATT GGCAAACAAA TTACAGAAGT ACTATTTCAA
CATAAACGTG TATCTAAATC TGAAGCAAAG TCGATGACAA TAAACATTTT AGAAAAAGTA
GGTATAAAAC ATGCAACTCG ACAATTTGAT GCTTATCCAC ATGAACTTTC TGGTGGTATG
CGTCAACGTG TCATGATAGC AATGGCATTG ATTTTAAAGC CACAAATTTT AATCGCAGAT
GAACCAACAA CGGCATTAGA TGCCAGTACA CAAAATCAAT TACTGCAGTT AATGAAGTCC
CTTTATGAGT ACACAGAAAC ATCTATTATT TTTATCACTC ACGATTTAGG CGCTGTGTAT
CAATTTTGCG ACGATGTGAT TGTAATGAAA GATGGAAGTG TCGTTGAAAG TGGCACGGTT
GAAAGTATTT TTAAATCGCC ACAACATACC TATACAAAAC GCTTAATAGA TGCGATTCCT
GATATTCATC AAACGCGTCC GCCAAGACCG TTAAACAATG ATATTTTATT AAAATTCGAT
CGCGTGAGCG TGGATTACAC ATCACCGAGT GGCAGCCTAT ACCGAGCAGT TAATGATATT
AACTTGGCTA TTAGAAAAGG CGAAACATTA GGCATTGTCG GTGAATCAGG GTCAGGGAAA
TCGACATTAG CTAAGACGGT CGTCGGTCTA AAGGAAGTGT CAGAAGGCTT TATTTGGTAT
AACGAATTAC CATTAAGTTT ATTTAAAGAT GATGAATTGA AATCTTTACG ACAAGAGATA
CAAATGATTT TTCAAGATCC ATTCGCATCT ATTAATCCAA GATTTAAAGT CATTGATGTG
ATTAAACGAC CACTAATCAT TCATGGGAAA GTCAAAGATA ATGATGACAT TATTAAAACT
GTCGTATCGT TGTTAGAAAA GGTTGGCCTA GATCAAAGTT TCTTATATCG CTATCCACAC
GAATTATCTG GTGGGCAACG TCAGCGTGTA AGTATCGCGA GAGCACTTGC TGTAGAACCT
AAAGTGATTG TTTGCGACGA GGCAGTGTCC GCTTTAGACG TTTCAATTCA AAAAGATATC
ATCGAGTTAT TAAAACAATT ACAGTTAGAC TTCGGCATCA CTTATTTATT CATCACACAT
GACATGGGTG TTATCAATGA AATATGTGAT CGCGTTGCAG TTATGAAAAA TGGCGAAATC
GTTGAACTGA ATAACACAGA AGATATTATC AAACATCCGC AATCAGACTA TGCAAAGCAA
CTTATTTCAG AAGTAGCAGT TATTGCTAAA TAA
|
|---|
| Protein sequence | MSNLLEVNSL NVQFNYDETT VQAVKNVSFE LRKKHILGIV GESGSGKSIT AKSILGLLPD
YPDHTLTGEI IFNGQSLNNL STSALQQIRG KDISMIFQDP LSSLNPRLTI GKQITEVLFQ
HKRVSKSEAK SMTINILEKV GIKHATRQFD AYPHELSGGM RQRVMIAMAL ILKPQILIAD
EPTTALDAST QNQLLQLMKS LYEYTETSII FITHDLGAVY QFCDDVIVMK DGSVVESGTV
ESIFKSPQHT YTKRLIDAIP DIHQTRPPRP LNNDILLKFD RVSVDYTSPS GSLYRAVNDI
NLAIRKGETL GIVGESGSGK STLAKTVVGL KEVSEGFIWY NELPLSLFKD DELKSLRQEI
QMIFQDPFAS INPRFKVIDV IKRPLIIHGK VKDNDDIIKT VVSLLEKVGL DQSFLYRYPH
ELSGGQRQRV SIARALAVEP KVIVCDEAVS ALDVSIQKDI IELLKQLQLD FGITYLFITH
DMGVINEICD RVAVMKNGEI VELNNTEDII KHPQSDYAKQ LISEVAVIAK
|
|---|
| |