| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6398 |
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| Symbol | |
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| ID | 5320701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009622 |
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| Strand | - |
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| Start bp | 59766 |
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| End bp | 60977 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777978 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_001314910 |
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| Protein GI | 150378316 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCA GCCCTGAACT TGAGGCCATG ACGGCGGCCG ATGAGACGGC TGTCAGCAAC
AGGAACACTG GACGGAATCA AACCATCGGT ATGGCCGCCC TGCTCCTGGG GGGTGCTGTC
GCCGCCTATT TTGTGCTTGC CACGGCAGGA GAAACGCCGC GTGATGTCGT CGATAGCGAC
GAAGAGTTCC AGACGACGAC CTTCCGGCCG CCGTCATTCG TGCGTGAGCA GGAAGAGCCG
AAGCCGGAGA TAGAACCTGC AGTCATCAAT CTGCCGCCGC CACCTGAGCC GGTTCAAGAA
ACACCCGTTG ATACAACCGA GTTCAAGGTT CCTCCCCCGC CGGAGGTCGT TGAATACACG
CCCGACGCGG CGCCTGTCGA AGAGTTTCCC GAACGTTATA GGTCAGGCCT GATCTCGCTT
GATCAGAAAG GCAATGGCAG CGGCAACGGC GGATTTCCAG GCGAGGACGA TTCCGGGCTG
AGTGTCGCTG GCGAGGACCG CAACAGCAAG TACCTGGCTA CGGCCTCGAG TCTCGCCGAT
CGGAGCGCAA AGGCTCGGCA AATCGAACGC ATCGATGCCA TGATACCGGA AGGAACGTTG
ATCCCCGGCA TCCTCGAGAC CGCGATCAAC AGCGATCTCC CCGGCCAGAT TCGTGCGATC
ACGTCGCAGG ACGTATATTC TTTTGACGGG CGGCGCGTCC TCATTCCGAC CGGAACGCGC
CTCATTGGCG AATACCAGTC CGAGATCACC CGCGGGCAAA AACGGATTTT TGTTATCTGG
ACCCGGCTCA TTCGCGACGA CGGCGTGTCG GTGCGCCTCA ACTCGATCGG CACGGATAGC
TTGGGACGCT CGGGCTTGAC CGGCCACGTC GACAACAAAT GGCGCGAGCG GTTCGGCTCC
GCGATCATGC TTTCCGTCGT CGGCGCCGGC GCCAGCTTCC TTACCGGCTA CGGAAGCGGC
GAGGCGTTCG GCGACAACAA CAGCGAGGCA CAACGTGGCG AGGAGCTCGC CCGCGAAACC
ATCGCCGAGA CCTTCTCGGA TATGGCGAAC CAAGCCTTGA GCGAAAACCT GCGCATTCCT
CCCACCATCA GCGTCAGCCA GGGAGAGCGG ATCTTTGTCT ACGTACGCCA GGACCTCGAT
TTCAGCGCCA TGTATGACGA TCCGGTCACC GAAGCGATGA AGGAGATTCA ACGTGAACGT
CGCCGCAGGT AA
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| Protein sequence | MKRSPELEAM TAADETAVSN RNTGRNQTIG MAALLLGGAV AAYFVLATAG ETPRDVVDSD
EEFQTTTFRP PSFVREQEEP KPEIEPAVIN LPPPPEPVQE TPVDTTEFKV PPPPEVVEYT
PDAAPVEEFP ERYRSGLISL DQKGNGSGNG GFPGEDDSGL SVAGEDRNSK YLATASSLAD
RSAKARQIER IDAMIPEGTL IPGILETAIN SDLPGQIRAI TSQDVYSFDG RRVLIPTGTR
LIGEYQSEIT RGQKRIFVIW TRLIRDDGVS VRLNSIGTDS LGRSGLTGHV DNKWRERFGS
AIMLSVVGAG ASFLTGYGSG EAFGDNNSEA QRGEELARET IAETFSDMAN QALSENLRIP
PTISVSQGER IFVYVRQDLD FSAMYDDPVT EAMKEIQRER RRR
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