Gene Smed_6384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6384 
Symbol 
ID5320687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp47238 
End bp47681 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content57% 
IMG OID640777970 
Producthypothetical protein 
Protein accessionYP_001314902 
Protein GI150378308 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.792832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCGG AGGCCGCAAA AGCTGTCGTT CGTCGGTTTT ATACCGAGTT GTTTCGAGAT 
TTGGCCTTGG CCGAGGAGTG CATTAGTCCC GACTACGTGG ACCACAATAA CGCTGATGCC
GGACACGGGC CGAACGTCCT TCGCTCGCAT GTCGCTGCGC TCCTCCATAC GTTTCCTGAT
TTCACCATAG AGACCGAGGA TATCCTTGCC GAGGGAGACA GGGTTGTTAC CCGTGTCAGC
GGTAGAGGGA CACACGCTGG AACATGGATG CAGATCGAGC CGACCGGCTC GGTCATCCAC
GTTAAGGGCA TCAATATAGA CCGCGTCTCA AATTGGCGCA TTGTTGAGCA CTGGGGCGAA
GCAGACACCG TCGGCATGCT GATCCAAATG GGCGTTGCCC CTTTTTCAGG GCGTGCAATC
GGAGAGCCGC CGACTCCTTG GTAG
 
Protein sequence
MSAEAAKAVV RRFYTELFRD LALAEECISP DYVDHNNADA GHGPNVLRSH VAALLHTFPD 
FTIETEDILA EGDRVVTRVS GRGTHAGTWM QIEPTGSVIH VKGINIDRVS NWRIVEHWGE
ADTVGMLIQM GVAPFSGRAI GEPPTPW