Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6384 |
Symbol | |
ID | 5320687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009622 |
Strand | + |
Start bp | 47238 |
End bp | 47681 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640777970 |
Product | hypothetical protein |
Protein accession | YP_001314902 |
Protein GI | 150378308 |
COG category | [R] General function prediction only |
COG ID | [COG5485] Predicted ester cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.792832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCGG AGGCCGCAAA AGCTGTCGTT CGTCGGTTTT ATACCGAGTT GTTTCGAGAT TTGGCCTTGG CCGAGGAGTG CATTAGTCCC GACTACGTGG ACCACAATAA CGCTGATGCC GGACACGGGC CGAACGTCCT TCGCTCGCAT GTCGCTGCGC TCCTCCATAC GTTTCCTGAT TTCACCATAG AGACCGAGGA TATCCTTGCC GAGGGAGACA GGGTTGTTAC CCGTGTCAGC GGTAGAGGGA CACACGCTGG AACATGGATG CAGATCGAGC CGACCGGCTC GGTCATCCAC GTTAAGGGCA TCAATATAGA CCGCGTCTCA AATTGGCGCA TTGTTGAGCA CTGGGGCGAA GCAGACACCG TCGGCATGCT GATCCAAATG GGCGTTGCCC CTTTTTCAGG GCGTGCAATC GGAGAGCCGC CGACTCCTTG GTAG
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Protein sequence | MSAEAAKAVV RRFYTELFRD LALAEECISP DYVDHNNADA GHGPNVLRSH VAALLHTFPD FTIETEDILA EGDRVVTRVS GRGTHAGTWM QIEPTGSVIH VKGINIDRVS NWRIVEHWGE ADTVGMLIQM GVAPFSGRAI GEPPTPW
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