Gene Smed_6356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6356 
Symbol 
ID5320659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp23472 
End bp24068 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content61% 
IMG OID640777949 
Productputative cytochrome c oxidase subunit III protein 
Protein accessionYP_001314881 
Protein GI150378287 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCACC GCGTCGTCCG GGACCTGGCA GATCTGCCAA GCTACGCCTT CGGCCCGCGC 
ATGACGATGT GGTGGGGCAC GTTGGCTTTT TGCGTGTTGG AGGGAACCGG CTTCGCGATC
GCTCTCGGGA GCTATCTCTA TCTCGCTTTC ATCAATCCGG ACTGGCCCCT CGGCCCGCCT
CCGCCCCTGC TCTGGTCGGG CATTTTCACG ATCCTGATGC TGGCAAGCCT CGTGCCCAAT
TTCCTGACGG AGTCCGCCGC GCGCGAAGAA AACCTTTCCA GAGTGCGTAT CCTGCTGGTC
GTGATGAGCG GCATCGGCGT GCTGCTCACG GGCGTCCGCA TCATGGAATT CGCCGTGCTT
CCGGTGCGAT GGGATTTCAA CGCCTACGGC TCGCTGCTGT GGGCCATTCT TGGCCTCCAC
GCAGCCCATC TCGTCACCGA TATCGTCGAC ACGGTCATAG TCACGGTGCT GATGTTTACA
CGCCATGGCT TCGGCAGGCG CTTCAGCGAT GTCGAGGACA ATGCGTTCTA CTGGAACTTC
GTCGTCCTCT CCTGGCTGCC GACCTATTTC GTCCTCTACT GGGTGCCGCG GCTATGA
 
Protein sequence
MEHRVVRDLA DLPSYAFGPR MTMWWGTLAF CVLEGTGFAI ALGSYLYLAF INPDWPLGPP 
PPLLWSGIFT ILMLASLVPN FLTESAAREE NLSRVRILLV VMSGIGVLLT GVRIMEFAVL
PVRWDFNAYG SLLWAILGLH AAHLVTDIVD TVIVTVLMFT RHGFGRRFSD VEDNAFYWNF
VVLSWLPTYF VLYWVPRL