| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6351 |
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| Symbol | |
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| ID | 5320654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009622 |
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| Strand | + |
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| Start bp | 17385 |
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| End bp | 19199 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777944 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001314876 |
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| Protein GI | 150378282 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.346402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.871662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCTT TCTTATTGCA ATGCTGCTTT CTGGCAGCTG TTTTGATACT TTCGCCGTCG
ATGTCCCGTA GCCAGCCGCA GGACGGAAGA ACGAGACCGG CCGCCCCCGC TTTTGCTGTC
TCACGTGACG ACGCGGACTG GCCCATTCCG GCGAAGAACA CGGCAGGCAC GCGGTACAGC
GAGCTGTCCG AGATCAACAC CCAGAACGTC AAGCAGCTCC AGGTCTCCTT CACCTTCTCG
ACCGGGGTCA ATAAGGGCCA TGAAGGCCCG CCCCTCGTCG TCGGCGGCCT GATGTTCATC
GTCTCGCCCT ATCCGAATAT CGTGTATGCA CTCGATCTGA CCCGACCCGG TGCCCCGCTG
AAATGGCAGT ACAATCCGGA GCCGGATGCC TCAGCCCAGG GTGTTGCCTG TTGCGATGTC
GTCAATCGCG GGCCGACCTA TTCCGATGGA CGGCTCTTCT TCACCACGCT CGATGCTCAC
GTGGTGGCGC TCGACGCAGG CACCGGCCGG GAAATCTGGA ACGTGAAGCT CGGCGAGATC
AATCGTGGCG AGACCATGAC CATGGCACCG CTGGTCGTGA AGGACAAGGT GATCGCCGGC
ATATCCGGCG GTGAATACGG GGTGCGCGGC TGGATCCAGG CGCTCGATGC CGCGGACGGG
AAAACCGTTT GGAAAGCCTA CAGCACCGGA CCCGATCGGG ACGTGAAGAT AGGTTCAGAC
TTCAAACCGT TCTACGAGGA GGACCGTGGC AAGGACCTCG GCGTCTCGAC CTGGCCCCCC
AATGCCTGGG AGATCGGCGG CGGCACCGTC TGGGGCTTCG CCAGCTATGA TCCCGATCTC
GATCTGATCT TCTATGGAAC GGCCAACCCC GGCCCATGGA ATCCGAATCA GCGCCCCGGT
GATAACAAAT GGACCAATAC CGTCTTCGCA CGCGATCCGG ATACCGGCGA GGCACGCTGG
GCCTATCAGT GGAATCCGCA CGATCTTCAC GATTGGGACG GAATCAATGA AAACATCCTC
GTCGACGTGG AATGGCGCGG AAAGCCGCGC AAGGCGCTGG TACATCCCGA CCGAAACGGA
CTGGTCTACC TGCTAGACCG CACCACGGGC GAAGTTCTCT CTGCCAGTTT CTACCACCCG
GTGAACACGC ATGGGGGCGT CGATCTAAAG ACCGGCCGCA TCAGAATCAA CGAGGAAAAG
TACCCACACG ATGGCAAGGT GATCCGCAAC GTCTGCCCCA CCGCGCCCGG AGCGAAGGAC
TGGAGTCCGT CTTCCTTCTC GCACCAGACC GGCCTCCTCT ACATCCCGCA CAACAATCTC
TGCATGGACT GGGAAAGCAC GGAAGCGAAC TACATCGCCG GCACGCCCTA TGTCGGCGCA
GAGGTGCGTA TGTATGCGGG GCCGGGCGGC CATCGCGGCG AACTCTCCGC CTGGGATATT
CTGGCCGGCA AGGAAGTCTG GACCATCAAG GAACGCTTCC CCGTCTGGGG CGGCACCATG
ACGACCGCAG GTGGGCTGGT CTTCTACGGC AACATGGAAG GCTGGTTCAA GGCCGTCGAT
GCGAAGACGG GCGCGGTGCT CTGGCAATTC AAGACCTCGT CCGGCATCAT CGGTCAGCCG
ACGACCTATC GCGGTCCTGA CGGCAAGCAG TATGTCGCCG TTCTGTCAGG CGTCGGCGGC
TGGGCGGGCT CAATCGTCTC CGGCGACCTC GACCCGCGCG ACAGCACCGC CGCGCTCGGC
TTCGTCAACG CCATGGCCGA CCTCAAGGAA GCCACCACGA AGGGAGGTAG CCTCTATGTT
TTCGCGCTGC CTTAA
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| Protein sequence | MRSFLLQCCF LAAVLILSPS MSRSQPQDGR TRPAAPAFAV SRDDADWPIP AKNTAGTRYS
ELSEINTQNV KQLQVSFTFS TGVNKGHEGP PLVVGGLMFI VSPYPNIVYA LDLTRPGAPL
KWQYNPEPDA SAQGVACCDV VNRGPTYSDG RLFFTTLDAH VVALDAGTGR EIWNVKLGEI
NRGETMTMAP LVVKDKVIAG ISGGEYGVRG WIQALDAADG KTVWKAYSTG PDRDVKIGSD
FKPFYEEDRG KDLGVSTWPP NAWEIGGGTV WGFASYDPDL DLIFYGTANP GPWNPNQRPG
DNKWTNTVFA RDPDTGEARW AYQWNPHDLH DWDGINENIL VDVEWRGKPR KALVHPDRNG
LVYLLDRTTG EVLSASFYHP VNTHGGVDLK TGRIRINEEK YPHDGKVIRN VCPTAPGAKD
WSPSSFSHQT GLLYIPHNNL CMDWESTEAN YIAGTPYVGA EVRMYAGPGG HRGELSAWDI
LAGKEVWTIK ERFPVWGGTM TTAGGLVFYG NMEGWFKAVD AKTGAVLWQF KTSSGIIGQP
TTYRGPDGKQ YVAVLSGVGG WAGSIVSGDL DPRDSTAALG FVNAMADLKE ATTKGGSLYV
FALP
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