Gene Smed_6287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6287 
Symbol 
ID5320589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1206913 
End bp1207731 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content66% 
IMG OID640777886 
ProductATPase 
Protein accessionYP_001314818 
Protein GI150378223 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG CCCTCAAGGC TCCAGCCATT CCGGACTCGG CCATCCCGGC CTATTCCCCT 
TCAGGCCGGG AATGCGAGCT CTTCGAAAGC GCCTGGACGC GCCAGCTTCC GCTTCTGCTT
AAGGGCCCGA CCGGCTGCGG AAAGACACGC TTCGTAGCCC ACATGGCGGC GAAGCTCGGC
CTGCCGCTTT CGACCGTGTC GTGCCATGAC GATCTCGCCG CCGCGGACCT GACCGGCCGC
TATCTCCTCA AAGGAGGCGA CACCGTCTGG GTCGACGGTC CCCTGACCAG GGCCGTGCGC
GAGGGCGGCA TCTGCTACCT CGACGAGATC GTCGAGGCCC GCAAGGATGT CGCGGTGGTG
CTGCATCCGC TCACCGACGA CCGGCGCATC CTGCCGCTCG AGCGCACCGG CGAGCTCCTG
GAGGCGCCGC CCGGCTTCAT GCTGGTGGTC TCCTACAACC CCGGCTACCA GAACCTGCTC
AAGACCCTCA AGCCGAGCAC GCGGCAGCGC TTCGTCGCCA TCGAGTTCGA CTTCCTGCCG
AGGGCGAGCG AGATTGCCGT CGTTTCCGAG GAGAGCGGGC TTGACGAGAG CCGGGTCGCA
CCGCTTGTCG ATCTCGCGCA TCGGCTGCGG AGTCTCAAGG GGCATGATCT CGAAGAGGGT
GTCTCGACGC GCCTGCTCGT CTATTGCGCC AGCCTTCTCG ACAACGGAGT GTCGGTGCGC
GACGCCGTCC TGGCGACGAT GATCGAACCG CTCACGGACG AGCCGGACGT CAAGGCCGCG
CTGATCGAGA TCGCAGACGC GGTCGTCCGC CAAGGATAA
 
Protein sequence
MNIALKAPAI PDSAIPAYSP SGRECELFES AWTRQLPLLL KGPTGCGKTR FVAHMAAKLG 
LPLSTVSCHD DLAAADLTGR YLLKGGDTVW VDGPLTRAVR EGGICYLDEI VEARKDVAVV
LHPLTDDRRI LPLERTGELL EAPPGFMLVV SYNPGYQNLL KTLKPSTRQR FVAIEFDFLP
RASEIAVVSE ESGLDESRVA PLVDLAHRLR SLKGHDLEEG VSTRLLVYCA SLLDNGVSVR
DAVLATMIEP LTDEPDVKAA LIEIADAVVR QG