| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6285 |
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| Symbol | |
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| ID | 5320587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 1203581 |
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| End bp | 1204933 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640777884 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001314816 |
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| Protein GI | 150378221 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.180348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.950475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCGG CTCTTGTCGC AAAATATGGC GAGGCACGTC TGCCCCGCTA CACAAGCTAT
CCGACGGCGC CACGTTTCTC GACCGCCGTC AGCGCCGGGA CCTATGGCGA CTGGCTCGCC
GCCATCGCAC CGGAGCAGAA GGCGTCGCTC TACCTGCACA TCCCCTTTTG TCGTTCGATG
TGTTGGTACT GCGGCTGTCA CACGACGATC ACCCAGCGCG ACCAGCCGAT CCTCGATTAT
CTCGACATGC TTCGCGAGGA GGTCCGTCTA GTCTCGGCAA AGACGCGAGC GCCGATTAGC
ATCGACCACG TGCATTTCGG CGGGGGGACT CCGACTGTCA TGCAGCCGGC GGAGTTCCGG
GCGCTGGTAG CACTGCTGCG CGAGCGGTTC GAGTTCGCGA GCACCACCGA AATCGCCGTG
GAGATCGACC CGCGAACCCT CGAGCCGGAA ATGGCGACGG CCCTCGGCGA AGCCGGTGTC
CGCAGGGCGA GCCTCGGGGT GCAGAGCTTC GACCCGGTCG TGCAGAAGGC CATCAACCGG
ATCCAGAGCG AGAAGCAGAC GATGGAGGCT GTTTCGCGCC TGCGTCAGTC CGGCGTCGGC
AGCATCAATT TCGATCTCAT CTACGGCCTG CCGCACCAGA CAGTCGAATC CTGCATCGCG
ACCGCCGAGG CAGCGATTCG GATGGGACCC GAGCGCTTCG CCGTCTTCGG GTACGCCCAC
ATCCCGTCGT TCAAGAAGCA CCAGAAGCTG ATCGACGAGC ATGCGCTTGC TGGTGCGGAA
GGCCGCGTCG CCCAGGCCGA AGCCATAGCG GCGACACTCG TCGCCGCCGG CTACCGCCGC
ATCGGCCTCG ACCATTTCGC CCTCCCGGAC GACGGCCTGG CGGTCGCGCA GGCAAGAGGT
CAACTGCACC GCAATTTCCA GGGCTACACG ACGGATGCCT GCGAAACGCT CATCGGCTTC
GGCGCCTCGG CGATCGGACG AATGAAGGAC GGCTATGTGC AGAACGAGGT ACCGCCGGGC
CTGTACGCTC AGCGCATAGC CTCGCGTCGG CTTGCAACGG TGAAAGGCTA CCGCATGACA
CCGGAGGATA GGCTTCGGGC AAGCATCATC GAGCGGCTGA TGTGCGACTT CGGCGTCGAT
GTTCCCGCCC TTGCCTCTGC GCACGGCTTT GACCCGGAGA TGCTGCTCCG CGGCAACGCC
AGGCTCGCAA TGCTGGAAAG CGACGGCATC CTTGATATCG CCGACGGCGT CATACGGCTG
CGCGAGGGGG GACGCTTCCT CATCCGCGCC GCCGCTGCAG CCTTCGACGC CTATATCGAG
CAATCGGGAC GGACGCATAG CAAGGCGGCG TGA
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| Protein sequence | MQPALVAKYG EARLPRYTSY PTAPRFSTAV SAGTYGDWLA AIAPEQKASL YLHIPFCRSM
CWYCGCHTTI TQRDQPILDY LDMLREEVRL VSAKTRAPIS IDHVHFGGGT PTVMQPAEFR
ALVALLRERF EFASTTEIAV EIDPRTLEPE MATALGEAGV RRASLGVQSF DPVVQKAINR
IQSEKQTMEA VSRLRQSGVG SINFDLIYGL PHQTVESCIA TAEAAIRMGP ERFAVFGYAH
IPSFKKHQKL IDEHALAGAE GRVAQAEAIA ATLVAAGYRR IGLDHFALPD DGLAVAQARG
QLHRNFQGYT TDACETLIGF GASAIGRMKD GYVQNEVPPG LYAQRIASRR LATVKGYRMT
PEDRLRASII ERLMCDFGVD VPALASAHGF DPEMLLRGNA RLAMLESDGI LDIADGVIRL
REGGRFLIRA AAAAFDAYIE QSGRTHSKAA
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