| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6279 |
|---|
| Symbol | |
|---|
| ID | 5320581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | + |
|---|
| Start bp | 1198212 |
|---|
| End bp | 1199423 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640777878 |
|---|
| Product | NnrS family protein |
|---|
| Protein accession | YP_001314810 |
|---|
| Protein GI | 150378215 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3213] Uncharacterized protein involved in response to NO |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.534482 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.20499 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGAT CAAAGGTGGC CAAGCGGGAA GGCTACGTGC CGCGGGGCCT CGCCCGCACG
GGCCCGGTGC TCTTTTCGTA CGGGTTCAGG CCCTTCTTCC TGGGCGCCGC TGTTTGGGCG
GTCGTCGCCA TGACCCTCTG GATCGCGGCC CTCGCAGGTC ATCTCGAAGT CGCCGGCAGC
TATGGGGCTC ACGCCTGGCA TGCGCACGAG ATGCTGTTCG GCTTCGCCCC GGCTGTCCTT
GCCGGCTTCT TGCTGACCGC GGTACCGAAT TGGACAGGCC GCCTCCCCGT CTCCGGCTGG
CCGCTCGCCG CACTGTTCGC GCTGTGGCTG GCGGGACGCG CGGCGTTGCT TTCCCCGGAT
GTGATCGGCA TCCCGCCCGC AGCGGCGATA GACGGCCTCT TCCTCCCGGC GCTGCTCTTG
ATCTGCGCCC GCGAGGTGAT CGCCGGCCGC AAGTGGAAGG ATCTGAAGGT GTTGGGCAGT
CTCCTCGCGT TGTCGCTCGC CAATGCCTGC TTTCATTTCG CCGTGGTCAT GGGAGACCAT
CCTCATATCG CAATGCGCCT CGGTATTTCC GCCTATGTGG CTCTCGTCAC CATCATCGGC
GGTCGGATCT TGCCGAGCTT CACCCGCAAC TGGCTGAATC GTGCCGGTCG GGCCGAATTT
CCGGTCCCCT ACAACCACTT CGACACAGTC GCCATTCTCG CAGGCATCGC AGCGCTTGGC
GCATGGACGC TTGTTCCCGA CCATCCGGTC ACGGCGGTGG CGGCTTTCGC CGCCTCACTG
CTGCACACCG TCCGGCTCGC CCGCTGGCGC GGTTGGCGCA CCTGGCCTGA AATGCTGCTC
ATCATACTGC ACGTCGCCTA TGCGTTCGTT CCCCTGGGAT TCGCCGCAAT CGGCATCGGC
GCGCTCGGCT TCGTCGAGGA ACATTCCGTC ATGCATGTGC TCACGGTGGG CGCCATCGCC
GCGATGATGC TAGCGGTCAT GACCCGCGCC AGCCGCGGCC ACACGGGTTA TGCGCTTACC
GCATCGCGAT TGACGGCCGC TTCCTATGCC GCGATCGTGG TGTCGGCACT GTTGCGCCCG
CTGGCGGAAA TATTTCCCTC CGTTGCAGCG AGCCTCTATG CCGTCTCCGG AAGCGCGTGG
ATCCTGGCCT TCGCGCTGTT CTGCGCTGAG TATGGACCGA TCCTGGTGCG CAAGCGGCGG
GCAGTACAGT AG
|
|---|
| Protein sequence | MNGSKVAKRE GYVPRGLART GPVLFSYGFR PFFLGAAVWA VVAMTLWIAA LAGHLEVAGS
YGAHAWHAHE MLFGFAPAVL AGFLLTAVPN WTGRLPVSGW PLAALFALWL AGRAALLSPD
VIGIPPAAAI DGLFLPALLL ICAREVIAGR KWKDLKVLGS LLALSLANAC FHFAVVMGDH
PHIAMRLGIS AYVALVTIIG GRILPSFTRN WLNRAGRAEF PVPYNHFDTV AILAGIAALG
AWTLVPDHPV TAVAAFAASL LHTVRLARWR GWRTWPEMLL IILHVAYAFV PLGFAAIGIG
ALGFVEEHSV MHVLTVGAIA AMMLAVMTRA SRGHTGYALT ASRLTAASYA AIVVSALLRP
LAEIFPSVAA SLYAVSGSAW ILAFALFCAE YGPILVRKRR AVQ
|
|---|
| |