Gene Smed_6134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6134 
Symbol 
ID5320436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1059357 
End bp1059776 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content56% 
IMG OID640777767 
ProductXRE family transcriptional regulator 
Protein accessionYP_001314699 
Protein GI150378104 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.577442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAGAA GCCAAGCGGA CAAGGACGCC GACGCGGCGC TGGGAACCAA CATTTGTCGA 
TTTCGGGAGA TCAGTGGGAT CTCGCAGAAG GAGCTGGGCG ATGCGATCGG CGTCACGTTT
CAGCAGGTAC GGAAGTACGA GAGCGGCAAG GATCGGATTT CATCGAAAAA GCTCGTCGAA
ACCGCCAGAA CGATTGGTTG TGATCTCAAC AGTCTTTATG CGGGTATCGG AATTGACGAC
GCAACATTGG CGTTCCTGGA TCACAGTAGG GCCGCTCTGA AACTAGCCGC CAATTTTGAT
GGAATCGCCT CATCAGAAGA GCGTGCTGCA ATCGCGCTGC TGCTGGCCGG GTCGCCACCA
AAGAAGAATA AGCCTCAATT TAGGCGTTGG GCCATTGGAA CGCCGGCAGC TCGGCCATGA
 
Protein sequence
MRRSQADKDA DAALGTNICR FREISGISQK ELGDAIGVTF QQVRKYESGK DRISSKKLVE 
TARTIGCDLN SLYAGIGIDD ATLAFLDHSR AALKLAANFD GIASSEERAA IALLLAGSPP
KKNKPQFRRW AIGTPAARP