Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6085 |
Symbol | |
ID | 5320387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 1020728 |
End bp | 1021204 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640777730 |
Product | nuclease |
Protein accession | YP_001314662 |
Protein GI | 150378067 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAAA ATTCGTCCTG TTGTTCACCG GTGTTGGCGC TGCTCTTGTC GGCCAGCCTC GCGACGGCTG CCGAAACCAT TACCGGCCGC TCAAGGGTGA TCGACGGAGA TACAATCGAA ATCAGAGGCG AGCGCATCCG CTTGCACGGC GTCGATGCTC CGGAAAGCTG GCGAGGATGC GAAGACGGCG ACGGCGGTAC CTATCGCTGC GGTAAAGAGG CCGCTTACGC GCTAGACAGT TTTGTTGCCC CGTCGCGCCC TATTCGTTGC GAGCTCGTCG AGCGCACTCG ATACAAGCGC CGGGTCAGCA TTTGCTTTCG CGCCGACGGT CGCGAGGTCA ATCGCTGGCT GGTTGAGAGT GGCAACGCGG CAGATTGGCC CTGTTGCGGC AAAGCGGGAC ACCTGGCGAG GAAGGTTCGT CCTGCCGTGC GAGGCGCGCG TGCGGTCCGC GCAAAACGGA ACGCATCATC ATGTTGA
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Protein sequence | MLKNSSCCSP VLALLLSASL ATAAETITGR SRVIDGDTIE IRGERIRLHG VDAPESWRGC EDGDGGTYRC GKEAAYALDS FVAPSRPIRC ELVERTRYKR RVSICFRADG REVNRWLVES GNAADWPCCG KAGHLARKVR PAVRGARAVR AKRNASSC
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