Gene Smed_6085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6085 
Symbol 
ID5320387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1020728 
End bp1021204 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content61% 
IMG OID640777730 
Productnuclease 
Protein accessionYP_001314662 
Protein GI150378067 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAA ATTCGTCCTG TTGTTCACCG GTGTTGGCGC TGCTCTTGTC GGCCAGCCTC 
GCGACGGCTG CCGAAACCAT TACCGGCCGC TCAAGGGTGA TCGACGGAGA TACAATCGAA
ATCAGAGGCG AGCGCATCCG CTTGCACGGC GTCGATGCTC CGGAAAGCTG GCGAGGATGC
GAAGACGGCG ACGGCGGTAC CTATCGCTGC GGTAAAGAGG CCGCTTACGC GCTAGACAGT
TTTGTTGCCC CGTCGCGCCC TATTCGTTGC GAGCTCGTCG AGCGCACTCG ATACAAGCGC
CGGGTCAGCA TTTGCTTTCG CGCCGACGGT CGCGAGGTCA ATCGCTGGCT GGTTGAGAGT
GGCAACGCGG CAGATTGGCC CTGTTGCGGC AAAGCGGGAC ACCTGGCGAG GAAGGTTCGT
CCTGCCGTGC GAGGCGCGCG TGCGGTCCGC GCAAAACGGA ACGCATCATC ATGTTGA
 
Protein sequence
MLKNSSCCSP VLALLLSASL ATAAETITGR SRVIDGDTIE IRGERIRLHG VDAPESWRGC 
EDGDGGTYRC GKEAAYALDS FVAPSRPIRC ELVERTRYKR RVSICFRADG REVNRWLVES
GNAADWPCCG KAGHLARKVR PAVRGARAVR AKRNASSC