Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6054 |
Symbol | |
ID | 5320356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 1000737 |
End bp | 1001462 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640777708 |
Product | methyltransferase type 11 |
Protein accession | YP_001314640 |
Protein GI | 150378045 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.202203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACAATC GACACAGAGC GGGCGGCTAC GACAGCATCC GAATTAATCG CGACGGCCAG GCAGAAGCCT TCGATGCCAT TGGCGCTCAC TATGATGAAG CCTTTCCAAA CAAACAGGGT CAAGTCTCAG CGGGCGATTG GCTGATCAGG TCCTTGCCGA CCGGGGCTCG GGTTCTGGAT CTGGGCTGCG GTACCGGCGT GCCAACTGCG CGCCAGCTCG TGGTCTCCGG TTTCGAGGTC GTGGGGATCG ATCTGTCAGT CGGAATGGTG AAACTCGCCC GGGAGTGTGT CCCCGGCGCG ACATTCCACC AGATGGACAT TGCCGACTTG CGACCAGGTG GACCGCGGGA ACTCGGCCAG TTCGACGCTG TCGCGGCCTT CTTCTCGCTG CTAATGCTGC CCCGTGCGGA GATTCCCCTC GCACTGCTGA CGATTCGCAA TCTGCTGGTC CCTGGTGGCC TGTTCGCCCT ATCCATGGTG GAGGCCGATG TCGACGATTT CTCAATCCCC TTCCTCGGAA ACAACATCCG AGTCTCCGGC TATCTGCGGG AGGATCTGCG GGCGATCATC GCTGAGGCTG GCTTCCAAAT AGTGGAGGAG ACCTCCTACA GCTATGCCAC GGCTGTCGGT GTGCCGCCGG AAGAACAGAT CTTCCTATGC TGTCGTATGG GCTTTTCGCG CAGCGGATCG ATGAGCATCT CCAGCGTCGG AAAGTCGGCG ATGTAG
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Protein sequence | MDNRHRAGGY DSIRINRDGQ AEAFDAIGAH YDEAFPNKQG QVSAGDWLIR SLPTGARVLD LGCGTGVPTA RQLVVSGFEV VGIDLSVGMV KLARECVPGA TFHQMDIADL RPGGPRELGQ FDAVAAFFSL LMLPRAEIPL ALLTIRNLLV PGGLFALSMV EADVDDFSIP FLGNNIRVSG YLREDLRAII AEAGFQIVEE TSYSYATAVG VPPEEQIFLC CRMGFSRSGS MSISSVGKSA M
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