Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6005 |
Symbol | |
ID | 5320307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 961354 |
End bp | 962661 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640777679 |
Product | glutamine synthetase catalytic region |
Protein accession | YP_001314611 |
Protein GI | 150378016 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0174] Glutamine synthetase |
TIGRFAM ID | [TIGR03105] glutamine synthetase, type III |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0483742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00440887 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGACACAGG ATCTCGCGAC CATCGCCGCC GAGCGTGGCA TCAAATATTT CATGATCAGC TATACCGACC TCTTCGGCGC TCAGCGCGCC AAGCTTGTCC CGACAGAAGC GATCGCCAAC ATGCAGAAGG ATGGAGCGGG CTTTGCGGGC TTTGCCACTT GGCTCGACCT GACGCCGGCC CATCCCGATC TCTTCGCCGT TCCCGATGCC TCCTCTGTCA TCCAGCTTCC CTGGAAGAAA GACGTTGCCT GGGTCGCCGC CGATTGCGTG ATGGAAGACA AGCCCGTCGG GCAGGCGCCG CGCGTCGTGT TGAAGAAGCT GGTCGCGGAG GCCGCGGAGC ATGGTCTGCG GGTGAAGACG GGCGTCGAGC CAGAATTCTT CCTGATTTCG GCCGATGGCG AAAAGATCTC AGATGAATTC GATACGGCGG AAAAGCCCTG CTACGACCAG CAGGCCCTGA TGCGCCGCTA TGACGTCATC GCCGAGATCT GCGACTACAT GCTGGAACTC GGATGGAAGC CCTACCAGAA CGACCATGAG GACGCGAACG GCCAGTTCGA GATGAACTGG GAATATGACG ATGCGCTGAA GACGGCCGAC AAGCATTCCT TCTTCAAGTT CATGGTGAAA TCCGTCGCCG AGAAACACGG GCTGCGCGCC ACCTTCATGC CAAAGCCCTT CAAGGGCCTA ACCGGCAATG GCTGCCATGC GCATATCTCT GTCTGGGATA CGGACGGCAA GATCAATGCC TTTGCCGACA AGGCCATGCC CTTCGGTCTT TCGGCCAAGG GCAAGACCTT CCTCGGCGGC ATCATGAAAC ATGCCTCGGC GCTGGCCGCG ATCACCAATC CGACGGTTAA TTCCTACAAG CGCATCAATG CGCCACGCAC GATTTCGGGT GCCACCTGGG CGCCCAATAC CGTCACCTGG ACCGGCAACA ACCGCACCCA CATGGTGCGC GTCCCCGGCC CCGGTCGCTT CGAACTGCGG CTGCCCGATG GCGCGGTGAA CCCCTATCTT CTCCAGGCGA TAATCATCGC AGCGGGCCTG AGCGGCCTGA AGAGCGATGC CGATCCGGGG CCGCACTACG ACATCGACAT GTACCGCGAC GGCCATCTGG TGAATGATGC GCCCAAGTTG CCGCTGAATT TACTCGACGC GCTGCGCGCC TATGAGGAAG ACGAAGGCCT GCAGGCGGCA CTCGGCATGG AATTCTCCGC TGCCTATCTC AAGCTCAAAC ATGCCGAGTG GAATACGCAT TGCTCGCAGT TCAGCGCTTG GGAGCACCAG ACGACATTAG ATGTCTGA
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Protein sequence | MTQDLATIAA ERGIKYFMIS YTDLFGAQRA KLVPTEAIAN MQKDGAGFAG FATWLDLTPA HPDLFAVPDA SSVIQLPWKK DVAWVAADCV MEDKPVGQAP RVVLKKLVAE AAEHGLRVKT GVEPEFFLIS ADGEKISDEF DTAEKPCYDQ QALMRRYDVI AEICDYMLEL GWKPYQNDHE DANGQFEMNW EYDDALKTAD KHSFFKFMVK SVAEKHGLRA TFMPKPFKGL TGNGCHAHIS VWDTDGKINA FADKAMPFGL SAKGKTFLGG IMKHASALAA ITNPTVNSYK RINAPRTISG ATWAPNTVTW TGNNRTHMVR VPGPGRFELR LPDGAVNPYL LQAIIIAAGL SGLKSDADPG PHYDIDMYRD GHLVNDAPKL PLNLLDALRA YEEDEGLQAA LGMEFSAAYL KLKHAEWNTH CSQFSAWEHQ TTLDV
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