| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5912 |
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| Symbol | |
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| ID | 5320214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 877837 |
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| End bp | 879519 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777607 |
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| Product | ABC transporter related |
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| Protein accession | YP_001314539 |
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| Protein GI | 150377944 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.214443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGCGG CGCCGGCCCG TGGCATAGGG GTGCCCGCAC CCAACCAGGC TCCCCTTCCT
ATGATCCGTG TCGAAAATAT CAGCAAGTCC AACAGCCATC GCATACTCTT CATCGAAGCT
TCAGCCGCGT TGAATCGCGG CGAAAAGATC GGGCTCGTTG GCCCGAACGG GGCGGGAAAG
ACGACCCTCT TTCGGATGAT CACCGGTGAG GAGGAACCCG ACGAGGGACA GGTTTCCGTC
GAAAAGGGCG TGACGATCGG CTATTTCGAT CAGGATGTCG GCGAGATGTC CGGCCGGTCG
GCCGTCGCGG AGGTGATGGA AGGGGCAGGC CCAGTCAGCG CCGTGGCGGC GGAGCTGCGG
GCGCTCGAGG CGGCCATGTC GGACCCGGAC CGCATGGATG AAATGGATGC GATCATCGAG
CGCTACGGCG AAGTGCAGGC CCGCTATGAG GAGCTCGACG GCTATGCGCT CGAGGGGCGT
GCGCGCGAGG TTCTCGCCGG TCTCAGCTTC AGCCAGGAAA TGATGGACGG CGACGTCGGC
AAGCTGTCGG GCGGCTGGAA GATGCGCGTG GCGCTCGCCC GCATCCTCCT GATGCGTCCG
GACGTCATGC TGCTCGACGA GCCGAGCAAC CATCTCGATC TCGAAAGCCT GATCTGGCTG
GAAGACTTCC TGAAGGGCTA TGACGGCGCC CTGCTGATGA CGTCGCACGA TCGGGAGTTC
ATGAACCGGA TCGTTACCAA GATCGTAGAA ATCGACGGCG GCGCGTTGAC GACCTATTCC
GGCGATTACG GCTTCTATGA GGAGCAGCGG GCGCTGAACG AAAGGCAATT GCAGGCCCAG
TTCGAGCGTC AGCAGGCGAT GCTCGCCAAG GAGATCAAAT TCATCGAGCG TTTCAAGGCC
CGCGCCTCGC ACGCGTCGCA GGTTCAAAGC CGGGTGAAGA AGCTTGACAA GATCGACCGC
GTCGAGCCGC CGCGTCGTCG CCAGACCGTC TCCTTCGAAT TCCTGCCGGC TCCGCGCTCC
GGCGAAGACG TCGTCAATCT CAGGAATGTC CACAAGGCCT ATGGCAGCCG CGCCATTTAC
GAGGGTCTCG ACTTCATGGT GCGCCGGCGC GAACGCTGGT GCATCATGGG CGTCAACGGC
GCCGGCAAGT CGACGCTGCT CAAGCTGGCC ACCGGCACAA CCACACCGGA CAGGGGCAGC
GTTTCACTCG GCGCCAGCGT GAAGCTCGGC TATTTCGCCC AGCATTCCAT GGATCTGCTC
GACGGCGAGA GCACCATTTT GCAATGGCTG GAGGACCGCT TTCCCAAGGC CGGACAGGCG
CCACTCCGGG CGCTGGCCGG CTGTTTCGGC TTTTCGGGCG ATGACGTCGA GAAGCGATGC
CGGTCCCTCT CCGGCGGAGA GAAGGCACGG CTGGTCATGG CCGCAATGCT GTTTGACCCG
CCGAACTTCC TCGTCCTGGA CGAGCCGACC AACCACCTCG ACCTCGATAC GAAGGAAATG
CTGATCCAGG CACTCTCGGC TTACCAGGGC ACCATGCTGT TCGTCTCGCA CGACCGCCGT
TTCCTGTCGG CACTTTCCAA TCGCGTGCTG GAGCTGACGC CTGACGGCAT CCATCAGTAT
GGCGGCGGTT ACAGCGAATA TGTCGAGCGC ACCGGACAAG AGGCGCCGGG TCTGCGCGGG
TGA
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| Protein sequence | MTAAPARGIG VPAPNQAPLP MIRVENISKS NSHRILFIEA SAALNRGEKI GLVGPNGAGK
TTLFRMITGE EEPDEGQVSV EKGVTIGYFD QDVGEMSGRS AVAEVMEGAG PVSAVAAELR
ALEAAMSDPD RMDEMDAIIE RYGEVQARYE ELDGYALEGR AREVLAGLSF SQEMMDGDVG
KLSGGWKMRV ALARILLMRP DVMLLDEPSN HLDLESLIWL EDFLKGYDGA LLMTSHDREF
MNRIVTKIVE IDGGALTTYS GDYGFYEEQR ALNERQLQAQ FERQQAMLAK EIKFIERFKA
RASHASQVQS RVKKLDKIDR VEPPRRRQTV SFEFLPAPRS GEDVVNLRNV HKAYGSRAIY
EGLDFMVRRR ERWCIMGVNG AGKSTLLKLA TGTTTPDRGS VSLGASVKLG YFAQHSMDLL
DGESTILQWL EDRFPKAGQA PLRALAGCFG FSGDDVEKRC RSLSGGEKAR LVMAAMLFDP
PNFLVLDEPT NHLDLDTKEM LIQALSAYQG TMLFVSHDRR FLSALSNRVL ELTPDGIHQY
GGGYSEYVER TGQEAPGLRG
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