| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5911 |
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| Symbol | |
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| ID | 5320213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 876240 |
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| End bp | 877643 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777606 |
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| Product | alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
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| Protein accession | YP_001314538 |
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| Protein GI | 150377943 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.28484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTC TCGTAATCGT TTCCAATCGT GTGCCCGTTC CGGACAAGGG TGGCATTGCG
CCCGCCGGCG GGTTGGCGGT CGCGCTGAAA GTGGCCCTTG AAGAGCATGG CGGCATATGG
ATGGGCTGGT CGGGGCAGTC GAGCGGCGAA CACGAGCCGC AGCCCATGGC TCAACTGCGC
CAAGGCAATA TCACCTATGC ACTCACGGAT CTGACCGATA CCGATGTCGA AGAATATTAC
CATGGCTTCG CCAACAGGGT TCTCTGGCCG ATTTGCCATT ATCGGTTGGA TCTCGCGGAA
TATGGTCGCA AGGAGATGGC GGGGTATTTC CGCGTCAACC GCTTCTTCGC CCATCGGCTG
GCGCCGCTCG TCGAACCGGA TGACATCATC TGGGTGCATG ACTACCACTT GATTCCTCTC
GCCGCGGAAC TGCGCCAGAT GGGTTTGAAG AACCGCATCG GCTTTTTCCT TCATATTCCC
TGGCCGCCTG CCGACGTGCT CTTCACCATG CCCGTTCACG AGGAAATCAT GCGCGGCCTG
TCGCATTACG ACGTCGTCGG CTTTCAGACC GATCATGACC TTGAGAACTT CGCCGGCTGC
CTCAGACGGG AAGGCATCGG CGATGAACTT GGCGGGGGCC GCTTCAGTGC CTATGGCCGT
GTGTTCAAGG GGGGCGTTTA TCCGATCGGC ATCGAGACCG CGGCCTTTGC CGAATTCGCC
AAAAAGGCGA TGACCAACAA GACCGTCAGA AAAGCGCGCG AAAGCATCGA GCACCGCAAC
CTCATCATAG GTGTCGATCG CCTGGACTAT TCCAAAGGGA TCACGCAGCG CATCGATGCG
TTCGAGCGTT TCGTCCTGGC CAATCCGGCT CAGCAGGGGC GTGTCACCTA TCTGCAGATT
ACGCCGAAGT CCCGCTCCGA AGTGCCTGAA TACGAAGCCA TGCAGCGCAC CGTGGCCGAA
CAGGCCGGCC GGGTGAACGG CGCGCTCGGC GCGGTCGACT GGGTTCCCAT TCGATACATC
AACCGCTCGG TCGGCAGACA TATTCTTGCC GGTCTTTACC GGTTCGGCAA AGTCGGCCTG
GTGACGCCGC TTCGAGACGG GATGAACCTC GTCGCAAAGG AATATGTAGC CGCGCAGGAC
CCCGAGGACC CAGGCGTGCT TGTACTTTCG CGCTTTGCCG GAGCTGCTCG CGAACTGAGA
GGCGCTCTGC TCGTCAACCC GTATGACATA GAGGGTACCG CCTTTGCCAT GGCGCGGGCG
CTCAGCATGC CGCTGGACGA GCGGAAGGAT CGCTGGAAGT CGATGATGGA TCACCTGCTG
GAACACGACG TTTCACGCTG GTGCCGGGAT TTTCTCGACG ACCTGACGGT ATCGGCCGGT
CAGCCGGGTT CTGAACCTGC ATGA
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| Protein sequence | MSRLVIVSNR VPVPDKGGIA PAGGLAVALK VALEEHGGIW MGWSGQSSGE HEPQPMAQLR
QGNITYALTD LTDTDVEEYY HGFANRVLWP ICHYRLDLAE YGRKEMAGYF RVNRFFAHRL
APLVEPDDII WVHDYHLIPL AAELRQMGLK NRIGFFLHIP WPPADVLFTM PVHEEIMRGL
SHYDVVGFQT DHDLENFAGC LRREGIGDEL GGGRFSAYGR VFKGGVYPIG IETAAFAEFA
KKAMTNKTVR KARESIEHRN LIIGVDRLDY SKGITQRIDA FERFVLANPA QQGRVTYLQI
TPKSRSEVPE YEAMQRTVAE QAGRVNGALG AVDWVPIRYI NRSVGRHILA GLYRFGKVGL
VTPLRDGMNL VAKEYVAAQD PEDPGVLVLS RFAGAARELR GALLVNPYDI EGTAFAMARA
LSMPLDERKD RWKSMMDHLL EHDVSRWCRD FLDDLTVSAG QPGSEPA
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