| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5910 |
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| Symbol | |
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| ID | 5320212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 875397 |
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| End bp | 876194 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777605 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001314537 |
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| Protein GI | 150377942 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.754111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.241767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGAGCC AGGAGCAACT TCTCAGCACC GCGAAACCGG ACGTGGTTTC AGGAGAGGAT
TTCATCCTCT CCGCTCTCTC GACAGATTTG CAAAGCTGGG CCCTGTTCCT CGATATCGAT
GGGACATTGC TCGACCTTGC GGAAACCCCG GACGCTATTA CCGTACCGCC TTCGCTGCCC
GCCGATCTCG ACGCCTTGTC GAAAAAGCTC GACGGTGCGC TCGCGCTCGT GACCGGCCGC
AGTCTTGACT ACGCCGACCA GCTCTTCTCG CTGTCGCATT TTCCCATTGC AGGACTTCAC
GGCGCCGAGC GCCGCGATCC GGACGGTCAA CTGCACAAGG CCACGGCGAC GGCAGAGTTC
GAGCGGCTGA AGGCCGATCT CGTGGCCGAT ACCGCCAGCT GGGCGGGCGT TTTCATCGAG
GACAAGGGGG CGGCAGTCGC CGCCCATTAC CGGCTTGCGC CGGACAGAAA GGACGACGTC
GAACTGGTGA TGGAGCGAGC GTTGATCCGC GCCGGACCGA ACTGGACCGT CCAGCAGGGA
AAGATGGTGA TCGAAATCCG TCCGGCCAGT GCCGACAAGG GCAAGGCAAT ATCGGCCTTC
CTGGCCAAGC CCCCCTTTGC AGGCAGACGC CCGATTGCGA TCGGGGATGA TGTCACCGAC
GAAGCGATGT TTCGCGCGGC CAACCGTCTC GGAGGCTATT CGATACGCAT CGGACCACAC
TTGCCTGCGA GCGAAGCGCT CGGTTCCACC CGCTCTGCCG AGGCGCTGCG CGGCATCATC
GCCGCCCTGG CCTCCTGA
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| Protein sequence | MVSQEQLLST AKPDVVSGED FILSALSTDL QSWALFLDID GTLLDLAETP DAITVPPSLP
ADLDALSKKL DGALALVTGR SLDYADQLFS LSHFPIAGLH GAERRDPDGQ LHKATATAEF
ERLKADLVAD TASWAGVFIE DKGAAVAAHY RLAPDRKDDV ELVMERALIR AGPNWTVQQG
KMVIEIRPAS ADKGKAISAF LAKPPFAGRR PIAIGDDVTD EAMFRAANRL GGYSIRIGPH
LPASEALGST RSAEALRGII AALAS
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