Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5905 |
Symbol | |
ID | 5320207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 870674 |
End bp | 871651 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640777600 |
Product | hypothetical protein |
Protein accession | YP_001314532 |
Protein GI | 150377937 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.339531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGCA GACGTGGATT TCTCGCCGGC ACGGCCGGCG TCGCAATGGC GGGTTTCGCA GGTATTCGCA TCAGCCTGGC TGCGACTTTT GAATCGATGG ACATCTTCAT CCCCGGTTCG CCCGGCGGCG GCTGGGACCT CACCGGCCGC GTTATTGACG AGGTCATGAA GAAGAACGGC CTCATCGGCA ATTCGCGGAT CACCAATGCC GGCGGCGCCG GCGGTACGAT CGGTCTGCCG CAGTTCATCA ACCAGTATGA CGGCGAAGCC GATGCGCTGT TCGTCGCCGG CGCCATCATG GTGGGCACCA CCATTACCAA CAACACGCCG GTCGACCTGA CGATGCTGAA GCCGGTGGCG CGACTGACCG GCGAGTACCA GGTGCTCGTC GTCCCGTCCG CTTCCCCTGT ACAGAACCTG ACCGACTTCG TGGCACTGCT GAAGAAGGAT CCAAGGTCTG TGACCTGGGC CGGCGGAGCG CCCGGCGGCA CCGACCACAT CTTTGCCTGC ATGATCGCGA AGGCGGCCGG TGTCGCGCTC GGCGATCTCT CCTATGTCGC CTATACCGGC GGCGGTGGCG AGGCCATGGC ATCCCTTCTC GGCAACCAGG TCTCCTGCGG CATTTCCGGT TACGGCGAAT TCGCGGAGCA GATCAAAGCC GGAAATTTGC GGGCGATCGC GATTTCCGCG CCGGAACGCG TGTCCGGCAT CGAGGTTCCG ACGCTTGTGG AACAGGGCGT CGACGTCACG ATCTCCAACT GGCGCGGCGT CTTCGGCGCG CCGAACATCG GCGACGACGA GGTCAAGGCG CTGATCGACC TCACGACCAC GATGGTCCAG ACCAGGGATT GGAAGGACCA GCTCGCCACA CGCGGATGGA GCGATCAGTT CCTGCCGGGG GCCGAATTCG CGGCCTATCT TGAGAAGGAT ACGATCGCCA CGCGCAGCGT TCTCGTGGAC CTCGGCCTGG CAAAATGA
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Protein sequence | MISRRGFLAG TAGVAMAGFA GIRISLAATF ESMDIFIPGS PGGGWDLTGR VIDEVMKKNG LIGNSRITNA GGAGGTIGLP QFINQYDGEA DALFVAGAIM VGTTITNNTP VDLTMLKPVA RLTGEYQVLV VPSASPVQNL TDFVALLKKD PRSVTWAGGA PGGTDHIFAC MIAKAAGVAL GDLSYVAYTG GGGEAMASLL GNQVSCGISG YGEFAEQIKA GNLRAIAISA PERVSGIEVP TLVEQGVDVT ISNWRGVFGA PNIGDDEVKA LIDLTTTMVQ TRDWKDQLAT RGWSDQFLPG AEFAAYLEKD TIATRSVLVD LGLAK
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