| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5881 |
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| Symbol | |
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| ID | 5320183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 844062 |
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| End bp | 845570 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777576 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001314508 |
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| Protein GI | 150377913 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.901977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGGC TTGAAAACCT GCGCCGCAGC TTCCTCGACT GGAATGCGAT GGCCGAAGTC
CTGCCGGCCA TGGTCACGGT CGGCCTCAAG AACACGCTGA TCCTTGCGGC GGCCTCCACG
GTGCTCGGCG TTGTCATCGG CATGGTACTG GCCATCATGG GTATTTCGCG AGCCCCCTGG
CTGCGCATTC CAGCCCGCAT CTATACGGAC ATCTTCCGAG GCCTTCCCGC CATCGTCACC
ATCCTTTTGA TCGGCCAGGG CTTTGCCCGT ATCGGCCGCG AACTGTTCGG GCCCTCGCCC
TATCCCCTCG GCATTCTCGC GCTCAGCCTG ATTGCCGGGG CCTATATCGG CGAAATCTTT
CGCTCGGGCA TTCAGAGCGT CGATCGGGGC CAGATGGAGG CATGCCGCGC GCTCAGCATG
AGCTATGGCC AGGGCATGCG CCTTATCGTC GTGCCGCAGG GCGTGCGCCG CGTGCTGCCG
GCGCTGGTCA ATCAGTTCAT AGGCAATGTG AAGGATTCGA GCCTCGTCTA TTTCCTCGGC
CTGCTCGCCT CTGAACGCGA GATCTTCCGC GTCGGCCAGG ACCAGGCCGT GGTGACCGGC
AACCTTTCGC CGCTGCTTCT CGCGGGCGTC TTCTATCTCG TGGTAACCGT GCCGCTCACC
CACGTCGTCA ATGCGATCGA CAGTCGCCTC CGGCTCGGCA AGCAGCGCCC GGCGATCATC
ACCAGCGGAC TGCAGGAGGT CAGCGAACTC GACAGCGCAA ATCGCGCCTC GCAGGCCACA
TTCAAGGGTG GCAGCCTGGA GGTCCGCGAT CTGGGCATGG CCTATGGCGA GCTCGACGTG
CTGAAGGGCG TTGATCTTTC GGTAAAGCCC GGTAGCGTCA CCTGCGTCAT CGGCCCATCC
GGCTCCGGCA AGTCGACGCT TCTGCGCTGC CTCAACCGTC TGGTCGAACC AAAGTACGGC
GATATCCTGC TCGACGGCGA GAGCATTCTT GCCATGAAGC CGGAACGGCT GCGCCGCCGG
GTGGGCATGG TTTTCCAGCA CTTCAACCTT TTTCCGGATC ATACGGCGCT GGAAAACGTC
ATGCTTTCGC TGACGAAGAT CAAGCGCTTG CCGAAAGCCG AAGCCGAGCG CATCGCCACC
GCGCGGTTGG CTGATGTCGG CCTGGCAGGC CGTCAGCATC ACCGTCCCGG CGGGCTTTCC
GGCGGGCAGC AGCAGCGCGT CGCCATAGCC CGTGCGCTGG CGATGGAACC GGAAGTCATT
CTGTTCGACG AAGTGACGAG CGCGCTCGAT CCCGAACTGG TCAAGGGCGT GCTCAACCTT
ATGGCCGAAC TCGGCGAGCG CGGTATGACC ATGGTCGTCG TCACCCACGA AATGGGCTTC
GCCAGACGCG TCGCCGACCA GGTCGTCTTC ATGGACGAGG GCCGCGTCGT TGAAGCCGGC
ACGCCCGAGG CGATCTTCGA CAAGCCGCAA AGCCCGCGGC TTCAGCGCTT CCTGGCGGAA
GTGCTCTGA
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| Protein sequence | MNWLENLRRS FLDWNAMAEV LPAMVTVGLK NTLILAAAST VLGVVIGMVL AIMGISRAPW
LRIPARIYTD IFRGLPAIVT ILLIGQGFAR IGRELFGPSP YPLGILALSL IAGAYIGEIF
RSGIQSVDRG QMEACRALSM SYGQGMRLIV VPQGVRRVLP ALVNQFIGNV KDSSLVYFLG
LLASEREIFR VGQDQAVVTG NLSPLLLAGV FYLVVTVPLT HVVNAIDSRL RLGKQRPAII
TSGLQEVSEL DSANRASQAT FKGGSLEVRD LGMAYGELDV LKGVDLSVKP GSVTCVIGPS
GSGKSTLLRC LNRLVEPKYG DILLDGESIL AMKPERLRRR VGMVFQHFNL FPDHTALENV
MLSLTKIKRL PKAEAERIAT ARLADVGLAG RQHHRPGGLS GGQQQRVAIA RALAMEPEVI
LFDEVTSALD PELVKGVLNL MAELGERGMT MVVVTHEMGF ARRVADQVVF MDEGRVVEAG
TPEAIFDKPQ SPRLQRFLAE VL
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