| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5858 |
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| Symbol | |
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| ID | 5320160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 820037 |
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| End bp | 821344 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640777553 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001314485 |
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| Protein GI | 150377890 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.437643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGA CAGTGGCCGG ACTAATGACC GGCATCGGTT TCATGTTTGC CTGCGGAACA
TCGGCGCAGT CGCAAGAACT GACGATCTTC TGGGCGGAAT GGGATCCAGC CAACTACCTC
CAGGAGCTTG TAAACGAGTA CGAAGCCGAG ACCGGTGTGA CGATCACCGT GGAGACGACA
CCTTGGGCGG ATTTCCAGAC GAAGGCCTTC ACCGAGTTCA ATGCCAAGGG ATCAGCCTAT
GATATGGTCG TCGGCGACTC TCAATGGATC GGGGCCGCGT CGGAGGCCGG CCACTACGTG
GATCTCACGG AGTTCTTCAA CAAGCACAAG CTAAAGGAGG TAATGGCCCC GGCGACCGTG
AAGTACTACG CGGAGTACCC CGCAAACTCC GGTAAATACT GGTCGATACC GGCCGAAGGC
GACGCTGTCG GTTGGTCCTA TCGTAAGGAT TGGTTTGAAG ATCCAAAGGA AATGGAGGCC
TTCAAGGCGA AGTATGGCTA TGACCTTGCT CCTCCGAAGG ATTGGAAACA ACTGCGTGAC
ATCGCCGAAT TCTTCCATCG TCCGGACCAG AAGCGCTACG GCATCGCAAT CTACACCGAC
AACTCCTATG ACGGATTGGT CATGGGCGTA GAGAACGCCA TCTTCTCTTT CGGTGGAGAA
CTCGGCGACT ACAGCACCTA CAAGGTGGAC AGCATCATCA ACTCGGAGAA GAACGTCAAG
GCTCTGGAAA CTTACCGCGA GCTCTATGGT TTCACGCCTC CGGGCTGGGC CAAGTCTTTC
TTTGTCGAGA ACAACCAGGC TATCACCGAG AACCTGGCAG CGATGAGCAT GAACTACTTC
GCCTTCTTCC CGGCGCTGGT CAATGAAGCT TCGAACCCGA ACGCGAAGGT CACCGGCTTC
TTCGCCAATC CCGCCGGTCC AGACGGGGAC CAGTATGCCG CTCTTGGCGG CCAGGGCATT
TCGATTGTCT CCTATTCCCA GAACAAGGAA GAGGCGATGA AATTTCTCGA ATGGTTCATC
AAGGACGAGA CACAGAAGCG CTGGGCCGAG CTCGGCGGCT ATACGGCAAG CGCCAAGGTT
CTGGAGTCGG AAGAGTTCCA GAACGCGACC CCATACAACA AGGCATTTTA CGAGACCATG
TTCCGGGTGA AGGACTTCTG GGCAACACCG GAATATGCCG AGTTGCTGAT CCAGATGAAC
CAGCGCATCT ATCCTTATGT CACCGCGGGC CAGGGCACGG CAAAGGAGGC GCTCGACGCA
CTTGCTGAGG ACTGGAATGC AACCTTCAAG AAGTACGGCC GCCACTAA
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| Protein sequence | MRKTVAGLMT GIGFMFACGT SAQSQELTIF WAEWDPANYL QELVNEYEAE TGVTITVETT
PWADFQTKAF TEFNAKGSAY DMVVGDSQWI GAASEAGHYV DLTEFFNKHK LKEVMAPATV
KYYAEYPANS GKYWSIPAEG DAVGWSYRKD WFEDPKEMEA FKAKYGYDLA PPKDWKQLRD
IAEFFHRPDQ KRYGIAIYTD NSYDGLVMGV ENAIFSFGGE LGDYSTYKVD SIINSEKNVK
ALETYRELYG FTPPGWAKSF FVENNQAITE NLAAMSMNYF AFFPALVNEA SNPNAKVTGF
FANPAGPDGD QYAALGGQGI SIVSYSQNKE EAMKFLEWFI KDETQKRWAE LGGYTASAKV
LESEEFQNAT PYNKAFYETM FRVKDFWATP EYAELLIQMN QRIYPYVTAG QGTAKEALDA
LAEDWNATFK KYGRH
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