| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5810 |
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| Symbol | |
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| ID | 5320112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 778768 |
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| End bp | 779658 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777509 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001314441 |
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| Protein GI | 150377846 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0965696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCT TGGGCGATGA CCACCCGGTG GCGCTGGTGA CGGGCTCCGC TTTGGGCATC
GGACGGGCGA TCGTCGAAGC TCTTCGCGAC GCTGGCTACG TTGTCTATGC CAGCATGCGT
GGGGTGGAGG GCCGGAACGC AGAGGCCGCC CAGTCGCTGA AGGCGCAAGG CGAGAACCGC
GTGCATCGCA TCGAGATGGA TGTCCTTTCG GAGGAAAGCT GCCAGGCGGC GGTGGAGCAG
CTCTGTCACG CGAGCGGCAG GCTCGATGTG GTGGTGAACA ATGCCGGGAT GCTGATGAAC
GGCATGGCGG AAAGCTTCAC TCCGCGCCAG TTCCTGTCGA TCCTCGATAC CAATGCGGTT
TCCTGGCTGC GCGTGAATCG CGCCGTTCTG CGTGCGCAGG GCCGAGGAAC GATTGTCTAT
GTCGGCAGCA CAACGACCTA CGTCCCCGAA CCCTTCATCG GTCTGTATCA GGCCAGCAAG
GCTGCAGGGG ACGCGCTTGC AAGAGCCATG GCGCTCGAGA TCCGGCCATT CGGGATAGAA
AGCCTGTTTC TTGTCCCGGG CGCTTTTCCC GAAGGAACCG ATCATTTCGC CGACGCCCAA
AGCGGCGATG ATCCGGAGCG AACCATCTCC TATGGCGCTC TGACGGATCG TCTGCCTGCC
CTGACGGGGC GGATCGAGAC CATAGACCGG GAGGAAGGTC TGGAGCTTGC GGTCCGTTCG
GTCGGCGAGC AGCTCGCGCA GGCGCTGGAA AAGCCGGTCG GCGAACGGCC CTCCCATGTG
TTTATCGATT GGGCAAGCGA AGGGCGCCGA TGCCATCGCC GAGGTCGTCG GGCAAGTCCA
ATCGCGCTTC ATCGAGAGGC TGGGATTCGG CGACCTTCTA CCGGCGTTTA A
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| Protein sequence | MSALGDDHPV ALVTGSALGI GRAIVEALRD AGYVVYASMR GVEGRNAEAA QSLKAQGENR
VHRIEMDVLS EESCQAAVEQ LCHASGRLDV VVNNAGMLMN GMAESFTPRQ FLSILDTNAV
SWLRVNRAVL RAQGRGTIVY VGSTTTYVPE PFIGLYQASK AAGDALARAM ALEIRPFGIE
SLFLVPGAFP EGTDHFADAQ SGDDPERTIS YGALTDRLPA LTGRIETIDR EEGLELAVRS
VGEQLAQALE KPVGERPSHV FIDWASEGRR CHRRGRRASP IALHREAGIR RPSTGV
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