| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5796 |
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| Symbol | |
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| ID | 5320098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 769200 |
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| End bp | 770780 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777500 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001314432 |
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| Protein GI | 150377837 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00815808 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00391201 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCGTT TAAACAGGTT TCTCATTTCG GCGCTGACGG TAGCGGCGAT TACCGCGCCG
GCGCTGTCCA CCTCCGCAAG TGCCGCCACG CTTCGCTGGG GCAGCCGCGC AGACATCTAT
TCGCTCGATC CGGATTCCGT TCCCTCGACA TCCAACCTTG CGTTCCTGAA CCACATCTAT
GAAGGTCTGA TCCGGTATGG ACCGAACTTC GAGATCGAGC CGGCGCTCGC CACCGAGTGG
AAGCTGATCG ACGACAAGCA CTGGCGTTTC ACGCTGCGCA AAGGCGTGAA GTTCCACAAC
GGCGCAGACT TCACCGCAGA CGACGTTGTC GCCTCCATGA ACCGCGTGTC GGACCCGGCC
TCGCCTCTGC GCGGCAACAT CCCGCTCTAT GTCGGCGTAA AGAAGGTGGA CGATTTCACG
GTCGACATCG AGGTTTCGGC GCCGACTGCG CTGTTCCTGA ACGACATGAC CAATATCTTC
ATGTTCAACG CGAAATGGCT GACGGATAAC AAGGCAGAAA AACCGACCGA TATCGCGTCC
AATACCGAGA ACTACGCGAC GCACAACACG AACGGTACGG GCCCGTTCAA GCTTGAGAGC
CGCGTTCCGG ACAGCAAGAC CGTTCTCATC GTCAACGACC TGTGGTGGGA TCAGAAGAAG
CACAATCTGG ACCGGATCGA GTATGTTCCG ATCGCATCGG CGGCGACGCG TGTCGCAGCG
CTTCTTTCCA ACGAAATCGA TCTGGTCGAT TCCGCACCCA TTCAGGACCT TCCTCGCCTG
GAATCCTCGC CTGGTATCAA AGTAAGCAAG CGCACGGAGC TGCGCACCGT GTTCATCGGC
TTCAACGGCA AGGCGAAGCT TGAAGATGGG CGTGCGAACC CGTTCCTCGA CGTTCGCGTT
CGTCAGGCCG TTGACGCAAG CATTGATCGC GATCTCATCA ACAAGAAGAT CATGCGCGGT
CTGGCGCGGC CCTCCGGCTC GCTCATTGCA CCGGAAATCG CCGGCTATGC GAAATCGCTT
GATACCTATC AGCCCGTCGA CACCGAGCTT GCCCAGAAGC TGCTCGCGGA AGCCGGCCAG
GAGGGTCTTG CCTTCACCTA TCTTTGCATG AACGACGAGA GCATCAACGA GGAAGACTTC
TGCTCGGGCA TCGCGAACAT GCTGAAGCGT GCCGGCTTTC AGCCCACAAT CGACATGGGA
CCGCGCGCCG TGCAGCAGCC TAAGCGCACC AATGGCAAGG CCGACATTTT CAACCTGAGC
TGGGCAAACG AACCGACGCT CGATGCCTAT TCGCTGCTCT CTCAAGTCCT CTCCACGCGC
AGCGGTTCGA CGGGCGTTTC CAACTATGGC GGCTGGTCCT ACCCGGAGCT CGACGAGCTG
GTGAAGAAGG CGGCACAGGA ACCTGACACC GCAAAGCGGC TCGCACTCGA AGAACAGGCC
CTGAAAATCG CCAAGGACAA GGCGATCCTG ATCCCGCTCC ACCAGCAGCC GATTGCCTGG
GGCATGCTGG ACACGGTCAA GAGCGTGGAT TTCCGCGCCG ACAACAAGCC GCGCCACTGG
CACACGCAAA TGGCCGAATA A
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| Protein sequence | MSRLNRFLIS ALTVAAITAP ALSTSASAAT LRWGSRADIY SLDPDSVPST SNLAFLNHIY
EGLIRYGPNF EIEPALATEW KLIDDKHWRF TLRKGVKFHN GADFTADDVV ASMNRVSDPA
SPLRGNIPLY VGVKKVDDFT VDIEVSAPTA LFLNDMTNIF MFNAKWLTDN KAEKPTDIAS
NTENYATHNT NGTGPFKLES RVPDSKTVLI VNDLWWDQKK HNLDRIEYVP IASAATRVAA
LLSNEIDLVD SAPIQDLPRL ESSPGIKVSK RTELRTVFIG FNGKAKLEDG RANPFLDVRV
RQAVDASIDR DLINKKIMRG LARPSGSLIA PEIAGYAKSL DTYQPVDTEL AQKLLAEAGQ
EGLAFTYLCM NDESINEEDF CSGIANMLKR AGFQPTIDMG PRAVQQPKRT NGKADIFNLS
WANEPTLDAY SLLSQVLSTR SGSTGVSNYG GWSYPELDEL VKKAAQEPDT AKRLALEEQA
LKIAKDKAIL IPLHQQPIAW GMLDTVKSVD FRADNKPRHW HTQMAE
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