| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5794 |
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| Symbol | |
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| ID | 5320096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 765805 |
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| End bp | 767367 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777499 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001314431 |
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| Protein GI | 150377836 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000436692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000177852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTGAAGA AACTGGGCCT CGCGGCCACG ATACTGGTTG GCCTGACCGT GTCCGGCCAC
GCCGAAACGC TTAAATGGGG CGCTGCGCGC GATATCTACT CGCTTGACCC CTATTCCTAT
GGCGACAGCT ATACGCTGTC CTTCCTCAAT CATATCTACG AAGGCCTGGT GCGTTACGAC
GCCAATCTCA AGATCGAACC GGCCCTCGCC GAATCCTGGG AAACGGTCTC CGATACCGTC
TGGCGCTTTC ACCTGCGCAA GGGCGTAAAA TTTCACGATG GAGCAGAATT CACTGCCGAC
GACGTGCTCG CATCGCTGAA GCGCGTCAGT GATCCGGATT CTCCGCTGCG CGGCAACCTG
CCGGCTTACA AGTCCTCCAA GAAGGTGGAC GACTATACCA TCGACGTCGA GCTGAGCGGG
CCCTATCCGC TGCTTCTCAA CGACCTCACC AATATCCATG TTTTCGATGC CGGTTGGCTG
AAGACCAACA ATTCGGAAAA GCCGACCGAT GTCGGCGCGA AGATCGAAGG CTACGCCACC
TATCACACCA ACGGCACCGG CCCGTTCAAG CTGGAAAGCC GGATGCCGGA TTCGAAGACG
ATCCTCGTGA AAAACCCGGA CTGGTGGGAC AAGACCTCCA AGTCGAACAT CGACCGCATC
GAGTTCACGC CCATCACCTC GGCGGCGACG CGCGTGGCCG CGCTCCTTTC CGGCGAAATC
AATTTCACCG AAAACGCGCC GTCGCAGGAC CTGCCGCGTC TGTTGGCGCA GCCTGAGCTG
AAGGTCATGG AACGCACCGA TCTGCGTACC GTAATGGTCG GCTTCAACCG CAAGCCCAAA
CTCGCCAACG GCTCGGAGAA CAAGTTCAAC GATCTGCGTG TGCGCCAGGC TTTCGCCCAT
GGGCTCGACC GGGAACTGAT CCAGAAGCGC GTCATGCGCG GCAAGTCGCG CACCGCAGGA
GCGGTGGTCG CGCCGGAGAT TCCGGGATAC GCGCCCGAGT TGGACACCAC GCTCCCCTAC
GATCCGGCCC TGTCGAAAAA GCTCCTGACC GAGGCAGGCG CTGCGGAATA TCCGTTCACG
CTGGTCTGCA CGACCGATGC CTATGTGAAC GAGGAGGAGC TGTGCCAGGG GCTGGTGAAT
ATGCTGAGCC GCGCCGGCTT CAAGCCGCAG CTCGACATTG CGCCCACCGC CGCACAGGCG
CCGAAGCGTA CCAGCGGCAA GTCCGACGTT TATCTGATCG GCTGGGCCAC TGAACCGATG
CTCGACAGCT ATTCGATCCT TCTCCAGATG ATGCAGACCA AGACGGCCAA TGCCGGCGTC
TTCAACTGGG GCGGCTGGAG CTATCCGGAG ATCGACGAGC TGATCGTCCA GGCATCGACC
GAAATGGATC GCGCCAAGCG TCTGGCGCTG CAGACCAAAG CGCTGCAGAT GGTGAAGGAA
GAGATCGTGA TGCTGCCCCT GCACCAGCAG CCGATGGCCT GGGTCATGTC GAACAAGATC
GACAAGATCG TGCAGTTGGC GGACAACAAG CCGCGTCACT GGCTGACGCA GTTTTCCGAG
TAA
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| Protein sequence | MLKKLGLAAT ILVGLTVSGH AETLKWGAAR DIYSLDPYSY GDSYTLSFLN HIYEGLVRYD
ANLKIEPALA ESWETVSDTV WRFHLRKGVK FHDGAEFTAD DVLASLKRVS DPDSPLRGNL
PAYKSSKKVD DYTIDVELSG PYPLLLNDLT NIHVFDAGWL KTNNSEKPTD VGAKIEGYAT
YHTNGTGPFK LESRMPDSKT ILVKNPDWWD KTSKSNIDRI EFTPITSAAT RVAALLSGEI
NFTENAPSQD LPRLLAQPEL KVMERTDLRT VMVGFNRKPK LANGSENKFN DLRVRQAFAH
GLDRELIQKR VMRGKSRTAG AVVAPEIPGY APELDTTLPY DPALSKKLLT EAGAAEYPFT
LVCTTDAYVN EEELCQGLVN MLSRAGFKPQ LDIAPTAAQA PKRTSGKSDV YLIGWATEPM
LDSYSILLQM MQTKTANAGV FNWGGWSYPE IDELIVQAST EMDRAKRLAL QTKALQMVKE
EIVMLPLHQQ PMAWVMSNKI DKIVQLADNK PRHWLTQFSE
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