| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5793 |
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| Symbol | |
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| ID | 5320095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 764776 |
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| End bp | 765744 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777498 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001314430 |
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| Protein GI | 150377835 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000255832 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000142665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTGGTTT TTATCATAAA GCGCCTGGCA AACGCCGTCA TGGTGATGTT GGCCGTCGCC
TTACTTGCCT TTCTGATTTT CCGGCTTGCG GGCGATCCCG TCGAGATGAT GGCCAACGAG
CAGATGACGC AGGCCGACCG CGACAATCTG CGCGAACGGC TGGGTCTCAA TGACAGCCTG
ATGACGCAAT ATACCCGTTT CGTGGTCAAT GCTGCACAGG GCAGTTTCGG CATCTCCTAC
CGCAACGGTC AAGACGTGCT GAGCCTGATC GCCGAACGAT TTCCGGCGAC GCTGGAGCTG
GTACTGGTCG CCACGCTTAT CTCGCTGCTG CTCGGCCTTC CCCTCGGCGT GCTGACGGCG
ATCAAGCGCG GCAAATGGTA CACGGAGGGT CTGCAGTTTC TCTCGATCGT CGGCGTGTCG
CTGCCGAGCT TCGTGGTAGG CATTCTGCTG ATCCTCGTCT TCTCGGTTAC GCTCGCCTGG
TTTCCGGCTT TCGGGCGCGG CGACGTCGTG CAGCTTGGCT GGTGGTCGAC GGGCCTCCTG
ACGCCTTCAG GCCGCGCGGC GATCCTGCTG CCGTCCATCG CGCTTTCGCT CTATCAGGTC
ACGCTGGTCA TGCGTCTGGT CCGCGCTGAA ATGCTGGAAG TTCTGCGCTC GGATTACGTC
AAGTTTGCCC GGGCCCGCGG CATTCCGCGC TGGCGCATCT ATTTCGTCCA TGCGCTGCGC
AACTGTCTGA TGCCGGTGGT GACCATGACC GCCATGAATG TCGGTTCGCT GATCGCCTTC
GCGCTCATTA CTGAAACCGT GTTCCAGTGG CCGGGCATGG GCATGCTGTT CATCCAGGCC
GTCACCTTCC TCGATATCCC CGTGATGGCG GCTTATCTCT GCATCATTTC CTTCATTTTC
GTCGTGCTCA ACACGCTGGT GGACATCGCC TATGCGGTCA TTGATCCCCG CCTGCGTACA
GCCCGCTGA
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| Protein sequence | MLVFIIKRLA NAVMVMLAVA LLAFLIFRLA GDPVEMMANE QMTQADRDNL RERLGLNDSL
MTQYTRFVVN AAQGSFGISY RNGQDVLSLI AERFPATLEL VLVATLISLL LGLPLGVLTA
IKRGKWYTEG LQFLSIVGVS LPSFVVGILL ILVFSVTLAW FPAFGRGDVV QLGWWSTGLL
TPSGRAAILL PSIALSLYQV TLVMRLVRAE MLEVLRSDYV KFARARGIPR WRIYFVHALR
NCLMPVVTMT AMNVGSLIAF ALITETVFQW PGMGMLFIQA VTFLDIPVMA AYLCIISFIF
VVLNTLVDIA YAVIDPRLRT AR
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