Gene Smed_5777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5777 
Symbol 
ID5320079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp750931 
End bp751341 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content56% 
IMG OID640777484 
Productresponse regulator receiver protein 
Protein accessionYP_001314416 
Protein GI150377821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0732019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00995229 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGGGGA AAAGTGACGA TGGCAGGTTT CTTGAGGGCC TCAGAGTCTT GGTCGTCGAG 
GATGAGGTTT GGATCGCTCT CGATTTGGAA GCAGCATTTG TCGATGTTGG AGCTCAGGTG
GTGGGACCGT GCGGGACCCT TGAGACCGCA TTGGTGGCAG CGAAGAATGA AGCGCTTGCG
CTCGCGGTGC TCGACATTCG CTTGGGAACG GCAACCACCG AGAGAGTCAT GGATCTCCTC
AACGAGCGGG GCATTCCATT CTTCTTCTAT AGTGGCCAAA CCCTACCCGA CGAGATGCGA
AAGAAAAGCA ACGGCGCCGT CGTCATGGTA AAGCCCGCCA TGCAGCAGGA TATTGTTGGG
AAGGCCGTGG AAGTGCTTAT GGCCTCGAGC ATGCCGATTT CCCCCTCGTA A
 
Protein sequence
MVGKSDDGRF LEGLRVLVVE DEVWIALDLE AAFVDVGAQV VGPCGTLETA LVAAKNEALA 
LAVLDIRLGT ATTERVMDLL NERGIPFFFY SGQTLPDEMR KKSNGAVVMV KPAMQQDIVG
KAVEVLMASS MPISPS