Gene Smed_5695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5695 
Symbol 
ID5319997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp667766 
End bp668467 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content59% 
IMG OID640777421 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001314353 
Protein GI150377758 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0746044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGTT CGCCTAATTT TCTTTCGAGG CTGGGTGAAG CAGCCGTCGC TGCCTTGTTC 
AAGCATTGGA TTGTTCGCTT GTATACTCCT GGCGAACTGA TCGTCGCGCA TGGCGAAAGC
GGGCGTGACG TCTTCTTCAT ACTGGAGGGG CGCGCCCGCG TAACCCTTTT TTCCGAAAAC
GGCCGCGAGA TCTTCTATGG CGACCGCGGC CCCGGCGACA TCATCGGGGA AGTGTCTGCA
ATCGATGGGA AGGCGCGATC GGCCAGTGTC GTGGCTCTTG AGGCAACCCG TGCAGCAAGA
TTGCCGGCGC CGGCCTTCCG AAGGCTGGTC ACCGACCACC CGGATTTTTC CTGGGCCCTG
CTCGAACACC TCTCGTCGGG CATAAGGCAT ATGACCGACC GGGTTTACGA GTTCAGCACC
TTAGTGGTGC GCAGGCGTCT CATTCTCGAA TTGCTCCGCC GTGCGGACGA TCGGGATGAA
TCCACCAGCC GAGTATTCAT TGACCCGGCG CCCACCCATT TCGAGTTGGC GGCATCAATT
AGCACACACC GGGAGGCGGT CTCTCGGGAG ATGAGCGTCC TCGCTAAGGG GGGCCTCATA
GAGAGATGCG GACGCAGGCT CCTGCTGTGC GACCTTACTG CTCTGGAATT GCTCGCCGGA
GATGAGGAGG AGCAGGTCTT TTCTCGTCGG GAAAAATCGT GA
 
Protein sequence
MTRSPNFLSR LGEAAVAALF KHWIVRLYTP GELIVAHGES GRDVFFILEG RARVTLFSEN 
GREIFYGDRG PGDIIGEVSA IDGKARSASV VALEATRAAR LPAPAFRRLV TDHPDFSWAL
LEHLSSGIRH MTDRVYEFST LVVRRRLILE LLRRADDRDE STSRVFIDPA PTHFELAASI
STHREAVSRE MSVLAKGGLI ERCGRRLLLC DLTALELLAG DEEEQVFSRR EKS