| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5557 |
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| Symbol | |
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| ID | 5319859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 524400 |
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| End bp | 525386 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777306 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001314238 |
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| Protein GI | 150377643 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.621423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0366433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCTT ATGTGGCAAA GCGCGTTCTT TACATGATCC CGACATTGTT CGGCATGTCG
TTGATCGCCT TCATGATCAT CCAGTTGCCG CCGGGCGACT ACCTTACGTC GCTGCTGTCG
ACCATGGCCG ATGGCGGACA GAACCTGGAT GAAGCGACAA TCGCGCGGCT GCGGGCCCAG
TATGGCCTCG ATCAGCCGGC ATATGTCCAA TATTTCGTTT GGATAACAGG GATCCTGACG
CGCGGCGATT TCGGCTACTC GTTTGAGTGG AACCAGCCGG TGTCCACCCT GATCTGGGAC
AGGATGGGAT CGACGCTGCT GATCTCGCTG GCGAGCCTGC TGCTAGTCTG GGCGATCTCC
CTTCCCATCG GCATCTATTC GGCTGTGAGG CGCCATTCGT TTGGCGATCA CGCCTTCACG
CTCGTGGGCT TTATTGGATT GGCGGTGCCA AATTTCATCA TGGCACTCAC CCTCATGTAT
ACGAGCTACC GGTTTCTTGG TCAGAGCGTC GGCGGCATCT CCTCACCGGC CTTCGTGGAT
GCGCCGTGGA GCCTTGCAAA GCTGCTGGAC ATGCTGAGCC ACATGTGGAT CCCTGTGATC
GTTATCGCCA TGTCGGGTAC GGCTGCGATG ATCCGGATTC TGCGGGCGAA CCTTTCCGAC
GAATTGAGCA AGCCCTACGT GGTGACCGCG CGCGCCAAAG GACTGCCCGA ACGCGAGATG
ATCCTCAAAT ATCCGGTCCG CATCGCGCTC AACCCGTTCG TCAGTTCGAT TGGCTGGGTG
CTGCCCGACC TCGTGTCCGG CGTTACCATC ACTGCCATCG TCCTCAACCT CCCGACCGCC
GGCCCTTTGC TCCTGCGGGC ACTCGTCGGA CAGGACATGT ATCTGGCGGG CAGCTTCATT
CTCTTGATGG GTGTGTTGAC GCTGGTGGGG ATGCTGATCT CCGACATCCT TCTGGCGGTG
CTTGATCCGC GTATCCGGTT CAACTGA
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| Protein sequence | MLAYVAKRVL YMIPTLFGMS LIAFMIIQLP PGDYLTSLLS TMADGGQNLD EATIARLRAQ
YGLDQPAYVQ YFVWITGILT RGDFGYSFEW NQPVSTLIWD RMGSTLLISL ASLLLVWAIS
LPIGIYSAVR RHSFGDHAFT LVGFIGLAVP NFIMALTLMY TSYRFLGQSV GGISSPAFVD
APWSLAKLLD MLSHMWIPVI VIAMSGTAAM IRILRANLSD ELSKPYVVTA RAKGLPEREM
ILKYPVRIAL NPFVSSIGWV LPDLVSGVTI TAIVLNLPTA GPLLLRALVG QDMYLAGSFI
LLMGVLTLVG MLISDILLAV LDPRIRFN
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