| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5542 |
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| Symbol | |
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| ID | 5319844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 505923 |
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| End bp | 506597 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777293 |
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| Product | ThiJ/PfpI domain-containing protein |
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| Protein accession | YP_001314225 |
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| Protein GI | 150377630 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.126229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA TCCTGATGGT TCTCACTTCG CATGATCGGC TTGGCAATAC GGGCCGGAAG
ACCGGGTTCT GGTTGGAGGA ATTTACGGCT CCCTACTATG TCTTCAAGGA TGCAGGCGCC
AGCATTACCG TCGCCTCTCC GCGGGGCGGG CAACCGCCGA TCGATCCCAA GAGCGACGAG
CCCGGCAATC AGACAGCTTC CATGACCCGG TTCAAGGGCG ACAAGGATGC TCAGTCCGTC
CTTGCAAACA CGGTGCGCCT CGCGACCGTA GATGCCAAGG ATTTCGACAC GATCTTCTAT
TCGGGCGGGC ACGGGCCGAT GTGGGATCTC GTCGAGGACC GGAAGTCGAT CTCCCTGATC
GAGGAATTCT ATGGCTCCGG AAAACCCGTT GCAGCGGTTT GCCACGCGCC TGCCGTCTTC
CACCACGTGA CGTTCCAGGG CAACCCGCTG GTGAAGGGCA AGCGGGTGAC CGGATTCACG
AACTCTGAGG AAGAGGCGGT ACAGCTGACC AAGGTCGTCC CGTTCCTGGT CGAAGATGAT
CTCAAGTCGC TGGGGGCGCA TTATGAGAAG GCGGGCGACT GGGAAAGCTT CGCGATCGTG
GATGGCCACC TGGTCACGGG CCAGAACCCC GCCTCGTCGA CTGCAGCGGC GAGATCGCTG
CTCGGCCTTC TCTGA
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| Protein sequence | MSNILMVLTS HDRLGNTGRK TGFWLEEFTA PYYVFKDAGA SITVASPRGG QPPIDPKSDE
PGNQTASMTR FKGDKDAQSV LANTVRLATV DAKDFDTIFY SGGHGPMWDL VEDRKSISLI
EEFYGSGKPV AAVCHAPAVF HHVTFQGNPL VKGKRVTGFT NSEEEAVQLT KVVPFLVEDD
LKSLGAHYEK AGDWESFAIV DGHLVTGQNP ASSTAAARSL LGLL
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