| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5458 |
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| Symbol | |
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| ID | 5319760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 425015 |
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| End bp | 425938 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777220 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001314152 |
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| Protein GI | 150377557 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0279925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.357497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAG AACCGTTACA CCGCCCCTCG ATCCACGACG TCAAGCCCAT CGCGGTGCCG
AAGGTCGGCC ACTGGATCGG CGGCGTGGTT CTTGCCATCC TGGCCGTCGT CTTCCTGCAA
GTGCTCGTCA CCAACAAGAA CATGCAATGG AGCGTCGTCG CCGAATACAT GTTCAGCCCG
GCCATCCTGT CGGGCCTCGG CATGACGCTG CTCCTGACGT TCCTCGCCAT GGTTCTCGGC
CTCGCGATTG GCGTCGTGCT TGCCATCATG CGCCTGTCGG CCAGCCGCGT CTTCCAGGTC
GTCAGCTGGG GGTGGATCTG GTTCTTCCGA GGGGTGCCGC CGCTGGTCCA AATGATCTTC
TGGTACAACC TGGCGCTTCT CCTGCCCGAA ATCTCGATCG GCATTCCCTT CGGCGGGCCG
AAGCTCCTTT CCTGGAACAC CAACCAGCTC ATCACCCCTT TCAGCGCCGC GATCATGGGC
CTTGCCTTCA CCGAGAGCGC CTATGCCGCC GAAATGATCC GCGCTGGCAT CCAGGCCGTG
AATGCAGGCC AGACGGAAGC GGCCGCCACG CTCGGCATGA AGCGCGGGCA GACGTTGCGC
CGCATCGTGC TGCCGCAGGC GCTACGCATC GTCATTCCGC CGATCGGCAA CGACACGATC
TCGATGCTGA AATTCACCTC GCTCGTCTCT GTGCTGGCGC TGCCCGATCT GCTCTATTCC
GCCCAGATGG TTTATGCGCG CACCTACCAG ACCGTGCCGC TGCTGCTCGT CGCGACGATC
TGGTATCTCG TGCTCACCAC GGTCCTGACG GTCGTCGAAC ATGCCGTCGA GCACCGATTG
AAATCCGAAC ACCACGCCGG CGCGAAGAAG GCGGGCGGGT TTTTCCCATT CCGGCTCTTC
GCACGCCAGC GGGAGGCCAT ATGA
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| Protein sequence | MSQEPLHRPS IHDVKPIAVP KVGHWIGGVV LAILAVVFLQ VLVTNKNMQW SVVAEYMFSP
AILSGLGMTL LLTFLAMVLG LAIGVVLAIM RLSASRVFQV VSWGWIWFFR GVPPLVQMIF
WYNLALLLPE ISIGIPFGGP KLLSWNTNQL ITPFSAAIMG LAFTESAYAA EMIRAGIQAV
NAGQTEAAAT LGMKRGQTLR RIVLPQALRI VIPPIGNDTI SMLKFTSLVS VLALPDLLYS
AQMVYARTYQ TVPLLLVATI WYLVLTTVLT VVEHAVEHRL KSEHHAGAKK AGGFFPFRLF
ARQREAI
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