| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5404 |
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| Symbol | |
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| ID | 5319706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 366745 |
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| End bp | 368478 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640777170 |
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| Product | sulphate transporter |
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| Protein accession | YP_001314102 |
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| Protein GI | 150377507 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor
[TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.428288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.878672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAGTAT CGACAGACAG ACAGAGCGAA GCGCCGGGCT TTGCTGAACT CTACACTCCA
AAATTTCTTA CAATCCTGCG CGAAGGCTAC GGATTGCCCC ACTTGCGCGC CGATGCAATA
GCGGGACTTA CCGTCGCCAT CGTAGCGTTG CCACTGTCGA TGGCCATCGC CATTGCCTCG
GGCGCAACGC CCGCGCAGGG GCTATATTCG GCAATCGTCG GTGGGTTCTT CGTCTCATTG
TTCGGAGGAT CGCGATTTCA GATAGGCGGC CCGGCCGGGG CCTTTATCGT GTTGGTCGCC
GCAACAGTCG CTCAACACGG CATGGATGGC TTAATCCTGG CAACCTTCCT TTCAGGTTTG
ATGCTCACCG CAGTTGGCCT CCTGCGGTTC GGAACATTCA TAAAGTTCAT TCCCTTCCCG
GTAACGGTGG GCTTTACGGC AGGGATTGCC GTGATCATCT TTGCCAGCCA GATCAAGGAC
CTTTTCGGTC TGACTTTGGA CCATGAACCA GGAGAGCTCC TTCAGAAGCT CCCAGTGCTG
TGGGGAGCAA AGGACAGCGT TGCGTCTGGC GCGGTCGGGA TCTCTATCAC TACCATTGCG
GTCATTCTCG GATTACGCCG CTGGCGACCG CGCTGGCCGG GGATGCTGAT CGCTGTTGCC
CTGAGCTCAA CCGCAACAGC ATTGCTTGCC CTGCCTGTCG AGACGATTGG AACCAAGTTT
GGCGGAATCC CCTCTGCACT GCCTTTCCCG CAACTGCCTG ATCTCTCGAT GGACAGGATT
GTAGCGGTTC TGCCAGCCGC ACTGTCCTTC ACCTTGCTAG GGTCCATAGA ATCGCTGCTA
TCAGCCGTAG TTGCGGATGG CATGACTGGT CGACGACACC GTTCCAACTG CGAGCTTGTT
GCTCAGGGTG CGGCAAATAT CGGTGCCTCG CTGTTCGGCG GCTTCTGTGT GACGGGCACC
ATTGCCCGTA CCGCTACCAA CATACGCGCT GGAGCGCACG GGCCAGTCGC CGGAATGTTG
CATTCAGCAT TTCTTCTTAT TTTCATGGTG ATCGCGGCAC CGCTCGCTGC ATATATCCCA
TTAGCAGCTC TGGCGGGCGT GCTGGCAGTC GTTGCCTGGA ACATGATCGA AAAGCCTGCA
ATCGCGATCT TGCTGCGCTC GGGTTGGGGC GAAGCAACCG TATTGGGGGC GACATTCTTC
CTGACAGTAT TCCGGGATTT GAGTGAGGCG ATTGTCGTTG GGTTCGCTCT TGGCTCAGTG
CTCTTTATTC ACCGTATGAG CCGAACAACC GCAGTCACCA CCCATGTACC GTTCGTGGCG
CGCGACGAAG CCGATGACGC CCATCCACGC AAAGCCTACA ATGAATCTGC TGCTGCGAAC
CCCGATGTTG TCGTCTACCG GATAACCGGT GCTCTCTTCT TCGGCGCGAC AGCATCAATC
GGCTCTGTTC TCGACCGCAT TCAGGACAAC CAAAAGGCAC TGGTCGTCGA TTTCTCCGCG
GTGCCGTTTC TGGACTCGAC CGGCGCCAAC ATGATCGAGG GCCTAGCGCA CAAGGCTCAC
AAGCATGGTG TGACCCTGTG GCTCACCGGA ACCACTCGCG ATATCCGGCG TGTCTTGCTG
AAGCATGAAA TAAAGAGGCC ACTGGTACGT TACGCGGCCA CAGTCGAAGC TGCCATATCA
GCTTTGCAAC GCGCGCGTAC AACCTTGAGG GCAGGACCAA CACAAGCAGC ATGA
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| Protein sequence | MKVSTDRQSE APGFAELYTP KFLTILREGY GLPHLRADAI AGLTVAIVAL PLSMAIAIAS
GATPAQGLYS AIVGGFFVSL FGGSRFQIGG PAGAFIVLVA ATVAQHGMDG LILATFLSGL
MLTAVGLLRF GTFIKFIPFP VTVGFTAGIA VIIFASQIKD LFGLTLDHEP GELLQKLPVL
WGAKDSVASG AVGISITTIA VILGLRRWRP RWPGMLIAVA LSSTATALLA LPVETIGTKF
GGIPSALPFP QLPDLSMDRI VAVLPAALSF TLLGSIESLL SAVVADGMTG RRHRSNCELV
AQGAANIGAS LFGGFCVTGT IARTATNIRA GAHGPVAGML HSAFLLIFMV IAAPLAAYIP
LAALAGVLAV VAWNMIEKPA IAILLRSGWG EATVLGATFF LTVFRDLSEA IVVGFALGSV
LFIHRMSRTT AVTTHVPFVA RDEADDAHPR KAYNESAAAN PDVVVYRITG ALFFGATASI
GSVLDRIQDN QKALVVDFSA VPFLDSTGAN MIEGLAHKAH KHGVTLWLTG TTRDIRRVLL
KHEIKRPLVR YAATVEAAIS ALQRARTTLR AGPTQAA
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