| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5364 |
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| Symbol | |
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| ID | 5319666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 330875 |
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| End bp | 332026 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777136 |
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| Product | HPP family protein? |
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| Protein accession | YP_001314068 |
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| Protein GI | 150377473 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3448] CBS-domain-containing membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.344775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.280172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTTC CGCCTCCACC CGATAATGTT CAGAAGCCAG GGTCTTCGCC CAGGTTTAAG
CTGTTTTCCC CGATCCTGGC GGGCGCAACG CTGAAAGAGC GCCTTATCGG CTGTCTCGGA
GCGCTGATCG GCATCTGTTT GACCGGTCTC GTCTGCGGGT TCATCTTCGG CGACGATCCT
CAGCTGCCGT TGATCGTTGC CCCCATCGGC GCTTCTGCGG TCTTGCTCTT TGCGGTTCCG
GCCAGTCCGC TTGCGCAGCC CTGGTCGATC ATCGGCGGGA ACACGATCTC CGCCCTGATC
GGCGTCACCG TGAGCTATTT CGTGAAGGAC CAGATGGTCG CCATCGGCCT TGCGGTTGCC
CTGGCGATCC TTGCCATGTC GCTCACGCGG TCGCTTCACC CCCCTGGAGG CGCCGCCGCG
CTGACAGCGG TGATAGGTGG AGCGGCGATC GCGCGCGCGG GTTTCTGGTT CCCGTTCATA
CCGGTAGCCA TCAACTCCCT GATCCTTGTG GGATTGGGCA TCGTATTCCA CCGGATGGCG
CGGCGCCAAT ATCCGCACCG ACCGGCTGTT GCACCAGTGA ACACGCATGA AACGGCCGAT
CCCCCGCCTG CGCTTCGGGT CGGCTTCAAT TCCGAGGACA TTGATCTCGC AATAGCACGC
TTGAACGAGA CACTCGACGT CAGCCGCGCG GACATCGATG CTCTCTTGAG GGAAGTCGAA
CTGCAGGCCC TCATCAGACA GAGGGGAGAG CTGACATGTG CCGACATCAT GTCCCGCGAC
GTCGTAACCG TTCCGGCCGA CACGACGCCG GACCATGCAC GATACCTCTT GTTGAAGCAT
GATATTCGAA CACTTCCCGT GCTCGACGAA AACGGGAAAC TGCAAGGGAC GGTCGGCCTG
CGAGAGCTGG CCGGCAAGGA ACCCGGCAGC AAACTGCCGA TCGCCGTGGC GGCCACCGCC
AACCCGTCCG ACCCTGCGAT CAGCCTGCTC CCCCGCCTGA CGGACGGCAT GACACATGCC
GTCGTCATAC TGGACGACGA CGAAAAGGTC GTGGGCATCA TATCCCAAAC CGACCTGCTC
GCGACTTTGG CCAAAAGCAT CTCCCAGAAC GGTGCGTCCG AGATCATGCG AGGCCACGGA
CAGGGCATCT AG
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| Protein sequence | MIVPPPPDNV QKPGSSPRFK LFSPILAGAT LKERLIGCLG ALIGICLTGL VCGFIFGDDP
QLPLIVAPIG ASAVLLFAVP ASPLAQPWSI IGGNTISALI GVTVSYFVKD QMVAIGLAVA
LAILAMSLTR SLHPPGGAAA LTAVIGGAAI ARAGFWFPFI PVAINSLILV GLGIVFHRMA
RRQYPHRPAV APVNTHETAD PPPALRVGFN SEDIDLAIAR LNETLDVSRA DIDALLREVE
LQALIRQRGE LTCADIMSRD VVTVPADTTP DHARYLLLKH DIRTLPVLDE NGKLQGTVGL
RELAGKEPGS KLPIAVAATA NPSDPAISLL PRLTDGMTHA VVILDDDEKV VGIISQTDLL
ATLAKSISQN GASEIMRGHG QGI
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