| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5362 |
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| Symbol | |
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| ID | 5319664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 329194 |
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| End bp | 329886 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777134 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001314066 |
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| Protein GI | 150377471 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0748621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGTGG AGCGTATTCT CGTCGTCGAC GACGAACCGC AGATCCAGCG TTTCCTGCGT
CCGGCGCTCA TCGCTGCGGG TTACGAAGTG GTGGAGGCGG CCGACGGGAC CCAGGCGCTT
AAGGCGGCCG CGACTGCGGC GCCCGACGTG ATCATCCTCG ATCTCGGGCT TCCTGACATG
GACGGCAAGG ATGTCGTCGC TAATATTCGC GCCTGGTCGC AGGTGCCGAT CATCATCCTT
TCCGCACGGG ACCGTGAAAG CGAGAAAATC GCGGCGCTCG ACCTCGGCGC CGACGACTAT
ATCGAGAAGC CCTTCGGCAT CGGCGAGCTG ACGGCGCGCA TTCGTGCGGC ATTGCGCCAT
CGCATTCAGA TGGAGGGGGG CCAGGCGCAA CTTTCGGCCG ACGGTCTCTC TATCGACATG
GTCAAACGCG CGGTCACCCG CGACGGCGAA CCGCTGCGGC TGACGCCCAA GGAATATGAT
CTGCTCGTCA TGCTCGCGCG GCACGCCGGA CGGGTGGTCA CCCATAAGAC GCTGCTCGCA
TCCGTCTGGG GTGTGGCACA TGGCGAGGAT CTACACTATC TGAGGGTCTT CATCGGCCAG
TTGCGCGGCA AGATAGAACG CGACCCAGGT CGTCCTAAGG TCATCCGTAC CGAGCCGGGC
GTCGGGTACC GTTTCGTCGG TGACGAGAGC TGA
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| Protein sequence | MTVERILVVD DEPQIQRFLR PALIAAGYEV VEAADGTQAL KAAATAAPDV IILDLGLPDM
DGKDVVANIR AWSQVPIIIL SARDRESEKI AALDLGADDY IEKPFGIGEL TARIRAALRH
RIQMEGGQAQ LSADGLSIDM VKRAVTRDGE PLRLTPKEYD LLVMLARHAG RVVTHKTLLA
SVWGVAHGED LHYLRVFIGQ LRGKIERDPG RPKVIRTEPG VGYRFVGDES
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