Gene Smed_5280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5280 
Symbol 
ID5319582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp242492 
End bp242938 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content59% 
IMG OID640777057 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_001313989 
Protein GI150377394 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTG TGACCAGTCT GAGTTTCCAA GGCCAGTGCC GAGAAGCCTT CGAGTTCTAT 
GCAAAGGTCT TGGGCGGGAG GATCACCGCC GCCCATTCCT ACGGCGAAGC CCCACCCGAC
ATGCCGATCA ACGATCCCAA ATACAAAGAT TGGCTGATGC ACTGCTGGCT GGAAGTCGGC
GAGCAGGCGC TGATGGGAGC CGACATGGAT GTCGGCTGGG CCCGCAATAT TGATAAACCG
AAGAACGGAT TCGACGTCAC CCTTCACACT GAGGACAATG CCGAGGGCCA ACGCTGGTTC
AATCAGTTGT CCGAAGGGGG CAAACCGGTC ATGCCTTTTG GCGAGACCTT CTGGTCGCCC
GGCTTCGGTT CCCTGATCGA CAGGTTTGGC GTTCCGTGGA TGATCAACGT CATTCCCCCG
GCCGGCTGGC AGCCAGCGCG GAGCTGA
 
Protein sequence
MKIVTSLSFQ GQCREAFEFY AKVLGGRITA AHSYGEAPPD MPINDPKYKD WLMHCWLEVG 
EQALMGADMD VGWARNIDKP KNGFDVTLHT EDNAEGQRWF NQLSEGGKPV MPFGETFWSP
GFGSLIDRFG VPWMINVIPP AGWQPARS