| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5228 |
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| Symbol | |
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| ID | 5319530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 187141 |
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| End bp | 188037 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777005 |
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| Product | pirin domain-containing protein |
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| Protein accession | YP_001313937 |
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| Protein GI | 150377342 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.739076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTATT TGTCGAATGC TGACATCGAA CAGATCATCC TGCCTCCGTC CCGAGACCTC
GGAGGATTCT CGGTCCGCCG GGCATTGCCT GCCGCGATGC GACAGATGGT AGGACCCTTC
ATATTCCTCG ACAGCTTCGG CCCGGTCCGC TTCGGCCCCG GCGAGGGTAT CGACACTCGC
CCTCACCCGC ACATTGGTCT GTCGACCTTG ACCTACCTTC TCGAAGGCGA GCTTCTGCAT
CGCGATAGCG AAAGCTACGT GCAGTCAATC AGCCCAGGCG AGGTCAATCT CATGGTCGCC
GGATCCGGTA TCGCCCATTC GGAGCGGACG CCCGAGCATA TTCGCACATA TGGTGGCAAG
CTTACGGGCC TGCAGAACTG GATCGCTCTG CCGAAAGTGT CGGAAGAAAC AGCTCCCCTC
TTTCAACATC TTGGTTCCGA TGAACTTCCG ACCGTCAACG GCGAAGGCAT CAACATGAAG
CTGCTTGCCG GCACCCTGCA CGGCCGCCGT TCGCCTGCTA CGATCTTCTC GGATCTCTTT
TCAGCGGAGA TCCAGCTTCA GGCAGGGGCA CGCTACAGGA TCGATGACGA GCATATCGAG
CGCGCGATCT TTGTCGTCAG CGGCACGATC GAACTCGTCG GCCAGGACGG TGTTTATGGC
CCGGATCGCC TCATCGTGTT CAAACCCGGA GCGGAAATCG TCGTGACGGC GAACGAACGG
GCGCGGTTCC TCGCCTTCGG AGGCGAGCCC CTTCCGGAGA AGCGGTTCAT CCGCTGGAAT
TTCGTTGCCA CCGATCAGGA GCGCATTCGC CATGCCGCCG ACCTCTGGCG CGAAGGGCGG
TTTCCCGGCG TGCCTGGCGA CGACGAATTC ATTCCCCTCC CCGAGAACTT CAACTGA
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| Protein sequence | MSYLSNADIE QIILPPSRDL GGFSVRRALP AAMRQMVGPF IFLDSFGPVR FGPGEGIDTR
PHPHIGLSTL TYLLEGELLH RDSESYVQSI SPGEVNLMVA GSGIAHSERT PEHIRTYGGK
LTGLQNWIAL PKVSEETAPL FQHLGSDELP TVNGEGINMK LLAGTLHGRR SPATIFSDLF
SAEIQLQAGA RYRIDDEHIE RAIFVVSGTI ELVGQDGVYG PDRLIVFKPG AEIVVTANER
ARFLAFGGEP LPEKRFIRWN FVATDQERIR HAADLWREGR FPGVPGDDEF IPLPENFN
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