Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5226 |
Symbol | |
ID | 5319528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 185661 |
End bp | 186272 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640777003 |
Product | TrpR binding protein WrbA |
Protein accession | YP_001313935 |
Protein GI | 150377340 |
COG category | [R] General function prediction only |
COG ID | [COG0655] Multimeric flavodoxin WrbA |
TIGRFAM ID | [TIGR01755] NAD(P)H:quinone oxidoreductase, type IV |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAG TTCTCGTTCT CTACTACTCT TCCTACGGCC ATATCGAAAC CATGGCCGCT GCAATCGCTG AAGGCGCAAG AAGCGCCGGC GCCGAGGTCA CGATCAAGCG CGTCCCCGAG ACGGTCCCGC TCGACGTTGC CGATAAGGCC CACTTCAAGA TCAACCAGGC TGCGCCGGTC GCGACCGTGG CAGAATTAGC CGACTACGAC GCGATCATTG TCGGCACCGG CACACGCTTC GGCCGCATGT CTTCACAATT GGCAGCCTTC CTCGACCAGG CCGGCGGCCT GTGGGCGCGC GGAGCCCTGA ACGGCAAGGT CGGCGCGGCT TTCGTTTCGA CCGGCACGCA GCATGGCGGT CAGGAAACAA CCCTGTTCTC CGTCATCACC AATCTTATGC ACTTCGGCAT GGTCATCGTC GGTCTTCCTT ATAGTCACCA GGGCCAGATG AGCATGGACG AAATCGTTGG CGGCGCTCCC TATGGCGCAA CAACGATTGC CGGTAGCGAC GGCTCCCGTC AGCCTTCGCA GATCGATCTT GCAGGTGCCT ATCATCAGGG CGAGATCGTC GCTCGCACCG CAGCCGCACT CGCTGCTGCT CACGCCGCAT AG
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Protein sequence | MTKVLVLYYS SYGHIETMAA AIAEGARSAG AEVTIKRVPE TVPLDVADKA HFKINQAAPV ATVAELADYD AIIVGTGTRF GRMSSQLAAF LDQAGGLWAR GALNGKVGAA FVSTGTQHGG QETTLFSVIT NLMHFGMVIV GLPYSHQGQM SMDEIVGGAP YGATTIAGSD GSRQPSQIDL AGAYHQGEIV ARTAAALAAA HAA
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