Gene Smed_5224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5224 
Symbol 
ID5319526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp184345 
End bp184791 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content58% 
IMG OID640777001 
Producthypothetical protein 
Protein accessionYP_001313933 
Protein GI150377338 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC AGCATGAAGC AGCAAAAGGT ATCGTACGCC GCAACACACT CGAAGTGCAG 
TCCGGCGGCA ATTTCGACCT CTTCGACGAA CTCTTCGCCG ACGACTTCCA TGACCACACT
CCGCAGCCTG GCGGGACGCC TGACAAGGAA GGCGCAAGCC GTCTTTATCA TGCCCTGCGC
GAGGCTTTTC CGGATTTCCA TGCCGAGATC CACTGGCAGA CGGTCGATAA CGACATCGTC
ACAACCTTCA AGACCTACCA CGGCACCCAT AAGGGCGCGG TTCTTGGGAT CGAGCCGACG
GACCGGGAAA TCAAGTTCGA AACCGTCGAC GCCATGCGCA TTCGCAACGG CCAGATCGTC
GAACACTGGG GTGTCGCCAA CCTCTATTAC CTCCTGCAGC AGCTCGATGC CCTGCCCCCC
TCAGCTCCAA AAGTGCCGGA ACTCTAA
 
Protein sequence
MSDQHEAAKG IVRRNTLEVQ SGGNFDLFDE LFADDFHDHT PQPGGTPDKE GASRLYHALR 
EAFPDFHAEI HWQTVDNDIV TTFKTYHGTH KGAVLGIEPT DREIKFETVD AMRIRNGQIV
EHWGVANLYY LLQQLDALPP SAPKVPEL