Gene Smed_5217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5217 
Symbol 
ID5319519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp179905 
End bp180453 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content57% 
IMG OID640776995 
Productflavin reductase domain-containing protein 
Protein accessionYP_001313927 
Protein GI150377332 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGAGA TATCCCCATC CAAAACCTAT CGCGTATTGG AACCGGGTCC TATCGTGTTG 
GTCTCCACGA TGGATAATGG AAAGCCCAAC GTCATGACGA TGGGCTTTCA TATGATGATC
CGGCACGATC CGCCGCTGAT CGGCTGCGTT ATCGGCTCTT GGGACCACAT CTATCAAGCC
CTCCGGAAAA CCGGAGAATG CGTCATCGCG GTGCCCGGGC TCGATCTGGC TGAAACCGCA
GTCGACGTCG GAAACTGCTC CGGTGATCGG GTGGATAAGC TCCAGAGATT CGGCCTGAAG
ACTCGGCCGG CCAAGGACGT CTCCGCTCCC TTGATCACGG ACTGCCTGGC AAATATCGAA
TGTGTAGTTG TCGATGGAAG GCTGGTCGAG CCATACAACC TCTTCATCCT TGGGGCCAAG
CGGCTGTGGG TCAACGAGGC CTGCAAAGAG GGTCGAATGC TTCACCACCT TGGCGACGGT
ATCTTCACCG TCGACGGCGG CAGGCTCGAT CTGAAGGAGC GCATGGTCAA ATGGCGCCAT
CTCCCCTGA
 
Protein sequence
MKEISPSKTY RVLEPGPIVL VSTMDNGKPN VMTMGFHMMI RHDPPLIGCV IGSWDHIYQA 
LRKTGECVIA VPGLDLAETA VDVGNCSGDR VDKLQRFGLK TRPAKDVSAP LITDCLANIE
CVVVDGRLVE PYNLFILGAK RLWVNEACKE GRMLHHLGDG IFTVDGGRLD LKERMVKWRH
LP