| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5215 |
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| Symbol | |
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| ID | 5319517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 177956 |
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| End bp | 178951 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640776993 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001313925 |
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| Protein GI | 150377330 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAGATA TGAAAGCATC CCGCCGCAAA GCACTTCCCC GAATACCGAT ATTGATCGGC
GGCACGTTGC ATATCCCGCC AGCCGTAGAA GAAAAGACTA CGCCGCCTGA ACGAACCTCC
CCGTTAGGTC TTGAACAATA CATTGCCGGC CGAACGCTTG TGAGCGGCGA TGGACCGGCC
TGGGACGATA TGTTCGTACA GGTCTATTCC CGCCTCAAGA AGCAGGAACC ATTTCTTGTT
CCCGCCGTCG CCGAGCCGCT TATTGTGTGG GTTATATCTG GCGAGGCGAT CGTTGAAGAA
CGTGAGATTG ATCGTGACTG GGTTACCAAC ACCGTGACGG TCGGGGACTT TTTCCTGACG
CGGTCTCCGA CACCCTACGA AATGCGCTGG CGTGCGACAG GCGCGGCTCC TTTCCAGGTG
ATGCACCTCT ATTTGTCAGT TCCTCTCTTC GAGCGCGTCG CAAAAGATCT GCTTGGCCGC
GCTGCGCGCC CCGCACTGCG TGACGTATCC GGTGGCAAGG ACGAGCAGCT GTCGCACCTT
CTGGCCCTGA TCCATCAGGA ACTTACGGCT GAAGGGAAAG GCAGCCAGCT GTTCATTCAG
GGACTTGCCC AGAGTCTCGC CGTCCACCTG ATCCGGAACT ATGCGTCGAA TGGCTCCGAA
GGCGGGCGGC AGACAGCACT TCCGGGTTTC AAGCTTCGGC GCGCTGTCGC CTATCTTGAA
GAACACCTGG CTGAGCCATT CAATCTCGCG AAACTATCCG AGGCCGTAGG CATGAGCGAG
TTCCATTTCA GCCGTCTGTT CAAGAAGGCG ACGGGCCTCT CGCCCTCCAG GTATTTCATT
CGCCAGCGTG TCGCCAGAGC ACAGCTGCTC CTGCAGGAGA CGGACACGAG CATTATCAAG
ATCGGCATGT CCGTGGGCTA TTCGAGCCCA AGTCACTTTG CCCAGGTCTT CCGGCGCGAG
ACAGGTCTCC CGCCGAGCCA CTATCGTCGA GGTTAG
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| Protein sequence | MEDMKASRRK ALPRIPILIG GTLHIPPAVE EKTTPPERTS PLGLEQYIAG RTLVSGDGPA
WDDMFVQVYS RLKKQEPFLV PAVAEPLIVW VISGEAIVEE REIDRDWVTN TVTVGDFFLT
RSPTPYEMRW RATGAAPFQV MHLYLSVPLF ERVAKDLLGR AARPALRDVS GGKDEQLSHL
LALIHQELTA EGKGSQLFIQ GLAQSLAVHL IRNYASNGSE GGRQTALPGF KLRRAVAYLE
EHLAEPFNLA KLSEAVGMSE FHFSRLFKKA TGLSPSRYFI RQRVARAQLL LQETDTSIIK
IGMSVGYSSP SHFAQVFRRE TGLPPSHYRR G
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