| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5198 |
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| Symbol | |
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| ID | 5319500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 156791 |
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| End bp | 158116 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776976 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001313908 |
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| Protein GI | 150377313 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.043341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAC CGTCAAGTGG CAAGAGCCTG GGTCTGGCCG CCTGTACCGC CATCGTCGTC
GGTAACATGG TTGGCTCCGG CTTCTACCTC TCGCCGGCGG CAGTTGCTCC CTACGGCAAT
CTCGCTATCG TCATCTGGAT CGTGATGGGA GCGGGTGCGA TCTGTCTCGG GCTGACGTTC
GCACGACTCG CCAAGCTCTC CCCGGCGGTC GGAGGGCCTT ATGCATATAC GCGCATAGCC
TATGGAGACT TCCCGGGATT TCTTATCGCT TGGGGATATT GGATTTCCAT CTGGGCGTCG
CTGCCCGTTA TCGCAGTGGC GTTCGCCGGC GTGGTCATCG ATTTTTTTCC GATCCTCCGC
GGGCGCGGAA CGGCGACGCT GCTCACGTTG AGCGTGATCT GGCTTGTCGT GCTCGTCAAC
TTACGCGGCG TCCACGCGGC AGGGCTCTTC TCCGAAATCA CCACCTACGC TAAGATGATC
CCGTTCGGGG CCGTCGCGCT GCTGGGCCTG TTTTACATCG ACTTCTCCCA CTTCGCCGAC
TTCAATCCGA GCGGCCAGCC GCTCCTTCAG GCGAGCGCTG CGTTGGCGCC GCTCACCATG
TTCGCCTATC TGGGGCTTGA ATCTGCCACG GTGCCCGCTG GCGATGTGCG CGACGCCGAA
CGTACGATCC CGCGTTCAAC GGTGCTTGGA ATCTCCATTG CTGTAACGCT GTACGTTCTC
GGCACCATTG TCGTTATGGG GTTGGTGCCG AGAGAGGAGC TCGTCCACTC GGTGGCACCT
TTCTCCGAGG CAGCAAGGAG AATGTGGGGA CCGGCCGGTG AACTAGCGAT TTCCCTGGCA
GTTGTCCTGT CGTCGATCGG AGCGCTGAAC GGCTGGACCT TGCTGATGGG TCAGGTGCCA
ATGGCGGCGG CGCGAGACGG ATTGTTTCCA CCGCTGTTCA GCCGGCTCTC GGCGCGAAGT
GTGCCCGCCA CGGGGATTGT CGTTTCGGCG ACTCTGGCGA CAATTCTCGT GCTCGTTCAG
GCAGCCGGTT CCGAGGGCTT CTCATCCATT TATCGGCTAT TCGTCGGCTT GAGCACAATG
ACGGCCGTTA TACCTTATGC GTTCTGCGCT CTTGCCAGCA GTCTGGTCTC AGCACGGGTT
AGCGGAGGGA CTGTAATACC GCGTGTAACC CTTATCGAGC TTGTTGGTTT CGCTTTTGCA
ATGTTCACGC TTTACGGCTG TGGTGCGGAG CCTGTCCTCT ATGGACTGAT GCTGCTGTTG
CTGAGCATCC CCGTTTACAT ATGGCAGCGA CGTCGGAGCT TCGTGCCGGG TGATTTCGGC
CAATGA
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| Protein sequence | MSAPSSGKSL GLAACTAIVV GNMVGSGFYL SPAAVAPYGN LAIVIWIVMG AGAICLGLTF
ARLAKLSPAV GGPYAYTRIA YGDFPGFLIA WGYWISIWAS LPVIAVAFAG VVIDFFPILR
GRGTATLLTL SVIWLVVLVN LRGVHAAGLF SEITTYAKMI PFGAVALLGL FYIDFSHFAD
FNPSGQPLLQ ASAALAPLTM FAYLGLESAT VPAGDVRDAE RTIPRSTVLG ISIAVTLYVL
GTIVVMGLVP REELVHSVAP FSEAARRMWG PAGELAISLA VVLSSIGALN GWTLLMGQVP
MAAARDGLFP PLFSRLSARS VPATGIVVSA TLATILVLVQ AAGSEGFSSI YRLFVGLSTM
TAVIPYAFCA LASSLVSARV SGGTVIPRVT LIELVGFAFA MFTLYGCGAE PVLYGLMLLL
LSIPVYIWQR RRSFVPGDFG Q
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