| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5194 |
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| Symbol | potE |
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| ID | 5319496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 149504 |
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| End bp | 150862 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640776972 |
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| Product | putrescine transporter |
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| Protein accession | YP_001313904 |
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| Protein GI | 150377309 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.330864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC ATTCGCTCAA CGTCGCCGTA GAAGCTGCGT CGAAGAAGAA AATGAACCTG
GTCCAGCTCA CCTTCATCGT TGCGGTGAAC ATGATGGGCT CGGGAATAAT AATGCTGCCG
GCGAACATGG CGCAGGTCGG CGCCATTTCA CTTCTGTCCT GGCTGGTGAC CGCGGTCGGC
TCGATGGCGA TCGCTTACGG ATTTGCACAA GCCGGTCTAT TCAACCAGCG TCCCGGAGGG
ATGTCGGCCT ATGCGGAGGA TGCCTACGGC AAACCAGGCT ATTTCCTCGT TTTCTTACTC
TATTTTCTTT CGCTCGCTGT CGGCAATGTG GCGATCGGCA TTTCGGCCGT CGGCTATCTC
GCGGGGTTCT TCCCGTGGCT GACGTCCACA CCGATTGCGA CTTGCGTTAG CCTGATCATC
CTTCTGTGGC TTACGACTGT AGCCAACTTT GGCGGGCCGC GCGTCACGGG CCGTATCGGC
TCAATTACGG TCTGGGGAGT GATCCTTCCC GTAGGGCTGC TCTGCATTAT CGGTTGGGCA
TGGTTCAGCT CGGAGGTTTT CGCGGCTGCC TGGAACCCCA ATGGACTGAC CCTGGTTCAA
GGCATGGGAT CGAGCATCTC GCTGACGCTC TGGGCCTTCC TGGGAATGGA ATCGGCTGCA
CAGAACTCCG ACGCGGTGGA AAATCCCAAG CGGGACGTTC CTCTTGCCTG CCTGTTCGGG
ACGCTCGGGG CCGCTATTAT CTACATTCTC TCGACCACAG TCATTCAAGG GATCGTGCCG
AACGCTGAGC TTGCCGCGTC GACAGGACCG TTCGCGCTTG CCTTTGCCAC GATGTTCAAC
CCCGCCATCG GATCAGTCGT CATGGCGCTG GCTGTTCTCG CCTGCGTCGG CTCGCTACTC
GGCTGGCAGT TCACCATCGC GCAGACGGCG CGGGCCGCCG CAGACGAGCG CATGTTTCCG
TCCCTCTTTT CGCGGGTGAA CGAGATGGGT GCGCCCGTAA CCGGGATGAT CGTTATGGGC
GTTGTTCAGT CTCTGCTGGC GCTCATGACG ATTTCACCCA CGCTCAACGA GCAGTTTGCA
GCGCTCGTCA ATCTTGCGGT CGTTACAAAC GTGCTTCCCT ATATCATCTC CCTTTCCGCA
CTCTTCGTCA TGATGAGGGC GGCTGGCGTT TCAGAAAGCA AGTTCCGCTT GAATTCTTCG
ATCGCGATCG TGGGCATGCT CTATAGCGTC TTTGCGATTT ATGCGTCCGG AAAGGATGCC
GTGCTGGGCG GTATGCTCGT CACCGGAATT GCCTTCATCA TTTACGGCCT TATCGCGCCT
CGCTTCACCG CAAGACCGGG GACTCTGAGG ACAGCGTGA
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| Protein sequence | MTEHSLNVAV EAASKKKMNL VQLTFIVAVN MMGSGIIMLP ANMAQVGAIS LLSWLVTAVG
SMAIAYGFAQ AGLFNQRPGG MSAYAEDAYG KPGYFLVFLL YFLSLAVGNV AIGISAVGYL
AGFFPWLTST PIATCVSLII LLWLTTVANF GGPRVTGRIG SITVWGVILP VGLLCIIGWA
WFSSEVFAAA WNPNGLTLVQ GMGSSISLTL WAFLGMESAA QNSDAVENPK RDVPLACLFG
TLGAAIIYIL STTVIQGIVP NAELAASTGP FALAFATMFN PAIGSVVMAL AVLACVGSLL
GWQFTIAQTA RAAADERMFP SLFSRVNEMG APVTGMIVMG VVQSLLALMT ISPTLNEQFA
ALVNLAVVTN VLPYIISLSA LFVMMRAAGV SESKFRLNSS IAIVGMLYSV FAIYASGKDA
VLGGMLVTGI AFIIYGLIAP RFTARPGTLR TA
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