| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5182 |
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| Symbol | |
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| ID | 5319484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 137376 |
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| End bp | 138077 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776960 |
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| Product | NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome |
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| Protein accession | YP_001313892 |
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| Protein GI | 150377297 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.477551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGTA TAAAGCGCCT CCTATTGTGG GTGTGGAAGG TTCTGGCCAC GCCGGCCGCA
ACGCTGAGCC TTGCCTTTTT GACACTCGGC GGCTTCGTCG GGGGCGTGAT CTTCTGGGGC
GCCTTCAACA CCGCCTTGGA GCTCACCAAC ACGGAGGAGT TTTGCGTCTC CTGTCATGAG
ATGCGGGCCA ACGTCTATGA GGAGCTGACA CGCACGGTTC ATTTCTCCAA CCGCTCGGGC
GTACGGGCGT CCTGTCCCGA CTGCCACGTG CCGCATGAAT GGACGGACAA GATCGCCCGC
AAGATGCAGG CCTCCAAGGA AGTGTGGGGC AAGATCTTCG GGACCATCAA CACGCGCGAG
AAGTTCCTCA ACCACCGCCT GGAACTCGCC AAGCACGAAT GGGCGCGGCT CAAGGCCAAC
GACAGCCTCG AGTGCCGCAA CTGTCACTCG TCGGCAGCGA TGGACCTTTC CAAGCAGACG
CAACGCGCCG CCGAGATCCA TACCCGCTAC CTGCTACCGG GCAGGGCGAC CTGTATCGAC
TGCCATAAGG GCATCGCCCA CGAACTGCCG AACATGCAGG GCGTCGAGCC CGGCTGGAAG
CTGCCGCCCG AACTCGAAGG AGAGACGCTG CCTTCTGCTT CGGCAATCGA CGACCTGAGG
AAGGTAATGA ATGACTCCCA CAGGGTAGCC TTTGGCAATT GA
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| Protein sequence | MARIKRLLLW VWKVLATPAA TLSLAFLTLG GFVGGVIFWG AFNTALELTN TEEFCVSCHE
MRANVYEELT RTVHFSNRSG VRASCPDCHV PHEWTDKIAR KMQASKEVWG KIFGTINTRE
KFLNHRLELA KHEWARLKAN DSLECRNCHS SAAMDLSKQT QRAAEIHTRY LLPGRATCID
CHKGIAHELP NMQGVEPGWK LPPELEGETL PSASAIDDLR KVMNDSHRVA FGN
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