| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5148 |
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| Symbol | |
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| ID | 5319450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 100452 |
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| End bp | 101996 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776926 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001313858 |
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| Protein GI | 150377263 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAA CTCTTCACAT TCCTGAGCAG GCAAGCCGCC GCGAGTGGAT TGGACTTTGC
GTTCTGTCGA TCGCTTGCCT GGTCTACTCG ATGGACCTGT CGGTGCTGTT CCTCGCTGTA
CCGGCGATCG TCGCGGACCT CGATCCGTCC GCATCGCAAC TGCTATGGAT CAACGATATC
TACGGCTTCA TGGTCGCAGG CTTTCTCGTC ACCATGGGGA CGCTGGGAGA TAGGATCGGC
CGCCGGCGTG TATTGCTGAT GGGGGCCTTT GCTTTCGGCA TCGCATCCGC CTTCGCTGCT
TTCTCGAATA GCGCGGGGCA ACTCATTCTG GCAAGGGCGC TGCTTGGCAT CGCCGGCGCG
ACGATCGCAC CCTCCACGCT CTCGCTCATC GTCAATCTCT TCAAAAACGA GGCGGAACGA
AACAGGGCGA TCGGCATCTG GGGCACCGCC TTTGCTCTGG GTGGCCTCGT CGGGCCGCTG
ATCGGCGGCA TTCTGCTGCA GTACTTCCAC TGGGGATCGG TATTCCTGAT CAATATACCA
GTCATGCTGC TGCTTCTGAT CGTCGCCCCT TTTCTGCTGC CGGAATACAG AAATGAAGAT
GCGGGCCGGC TGGATTTCCC GAGCGTGCTG CTTTCGCTCG CGACGGTTCT GCCTGTGATC
TACGGCCTTA AACATATGGC TGCCGACGGA TTCCAGCTTG CCCAGCTCGC TCCGATCGGA
CTGGGCATTT TGGTCGGTGT TCTATTTGTC CGCCGCCAGC GGCGCCTTAG CGATCCGTTG
ATCGACCTCG CGCTATTCCG GGTGCCCGCC TTCACGGCGT CCCTGATGGT AAACCTCGCC
GGTGTCTTCT TCGTCTTCGG TGTGTTTCTG TTCCAAAACC TCTTCCTGCA GCTAGTGCTC
GGTCTGTCAC CGCTCGAAGC TGCAATTTGG TCCGCGCCAT CGGCTTTCGT CTTCGCCGTG
ATGTCCTTCC AGGCCTACCG TTTCACCAAC CGCTTCGGCC CTGTCAAAAC GGTGCTCGGA
GGGCTTGTCA TCAATGCAGC GGGAGTCGCC GCCATGGCTG TTGCCGCTTA CGCCGAGAGC
CTGATCGGCA TCCTTGGCTC CAGCATGATC ATCGGCTTCG GCTTCGTCCC CGTCATTCTA
ACCACGACCG GCCTGATCGT GGGGACTGCA CCGCCCGAAC GGGCAGGCTC GGCTTCGGCC
ATATCGGAGA CGAGCGCAGA ATTCGGAGGC GCATTGGGAA TCGCGGTGCT CGGCAGCCTG
GCGACCTTCG TCTATCGCCT GGCGATGGAC CGCGCCGACC TGAGCGGCCT CAATCCCGTC
CAAGCCGAGG CTGTTTCTGC GACACTTGCC GGAGCAGTCG AGACAGCGCA ATCAATGCCG
GCATCCGCTT CGGCTGTCTG GCTGGAGGCA GCGAGGAGCG GCTTCTCGCT TGGTTTTGCC
ACATGCTGCG TCGTTGCTGC GGTCACGCTC CTTCTGCTCG CGATCGTCGC ACGACGGGTA
TATGCCACAG CCCACATCAA TGAGAGCACA TTGACCCCTC ATTGA
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| Protein sequence | MAETLHIPEQ ASRREWIGLC VLSIACLVYS MDLSVLFLAV PAIVADLDPS ASQLLWINDI
YGFMVAGFLV TMGTLGDRIG RRRVLLMGAF AFGIASAFAA FSNSAGQLIL ARALLGIAGA
TIAPSTLSLI VNLFKNEAER NRAIGIWGTA FALGGLVGPL IGGILLQYFH WGSVFLINIP
VMLLLLIVAP FLLPEYRNED AGRLDFPSVL LSLATVLPVI YGLKHMAADG FQLAQLAPIG
LGILVGVLFV RRQRRLSDPL IDLALFRVPA FTASLMVNLA GVFFVFGVFL FQNLFLQLVL
GLSPLEAAIW SAPSAFVFAV MSFQAYRFTN RFGPVKTVLG GLVINAAGVA AMAVAAYAES
LIGILGSSMI IGFGFVPVIL TTTGLIVGTA PPERAGSASA ISETSAEFGG ALGIAVLGSL
ATFVYRLAMD RADLSGLNPV QAEAVSATLA GAVETAQSMP ASASAVWLEA ARSGFSLGFA
TCCVVAAVTL LLLAIVARRV YATAHINEST LTPH
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