Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5146 |
Symbol | |
ID | 5319448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 98344 |
End bp | 99522 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640776924 |
Product | chaperone DnaJ domain-containing protein |
Protein accession | YP_001313856 |
Protein GI | 150377261 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.624054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCGCG ACCTGAACGG GCTCAAAGCC GTCATGCGCC ATGTAGCAAG TCTTCGAGGG GGCGTCATGT ATGACGGCAT GCTCCTGTTG CGGCCACTCC TCGACAAAGT CAATGGCATC TTCCAGGTTC GGGATCTCCG TGATCACCTG CCGAAAGGGC CCTTCGGTGA GGCTGGGCAA GACCGATGGC GATCCCATAT GATTTACGAA GGCGTGGCTC GAGCTTCGAG TCTGAGTCGC ATGTCGAATT GTTGGAGGTC ATCGGTGACT GACGATCCCT ACAAGGTTCT GGGTGTTCCG CGAACGGCCA CGCAGAACGA AATCCGCAAG GCTTATCGGA AGCGCGCAAA GGAATTGCAT CCCGACCTGA ATCCGGGCGA CCAACAGGTG GAAACTCAAT TCAAGGAGCT TTCGGCTGCT TATCGTCTGT TGAACGATCC CGAGCAGCGG GCTCGGTTCG ACCGGGGCGA GGTCGACGCT TCGGGGGCGG AGCGGCCCGA CCAGCGCTTC TACAGACACT ATGCCGATGC AGATCAGGCG GGCCGGTACA CATCGACGGG CGGATCGCGT GAATTCGAGG ATATTTCCGA CATTTTCTCG GACCTTTTCG GGGGGCAGGG CCGGGGAAAT TTCCAGGCCC GGGGACAGGA CCTGCACTAT CAATTGGAGG TCGAATTCCT CGATGCCGTG AACGGCGCCC GACGCCGGAT TACCCTTCCC GACGGGAAAA CGCTCGAGCT GGCCATTCCC GCGGGCACGC GCGACGGCAG CACGCTGCGG CTGAAGGGAA AGGGGGCGCC CGGGATCGGC GGCGCGGAAA GCGGAGACGC GCTGATCGCG GTCAATGTCC GTCCTCACCC GACATTCTCT CGCAATGGCA ATGACATCGA CGTGGAATTA CCCGTTACGC TTTACGAGGC GGTGCTCGGG GCAAAGATCG AGGTGCCGAC GATCTCCGGC CGCGTAGCCA TGACCGTGCC GAAAGGATCA AGTTCCGGCG ACGTGTTGCG TCTGAAGGGA AAGGGGGTGA AGCCAGAGAA CGGTCCCGCC GGCGATCAGC ACGTCAGGCT TAGGGTGGTG TTGCCGGAAA AAATGGATTC CGATCTTGAG AGCTTCATGG AAACCTGGCG CCGAACACAT GCCTATGACC CGCGCGAAGC GATGAGGAGG ACACTATGA
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Protein sequence | MPRDLNGLKA VMRHVASLRG GVMYDGMLLL RPLLDKVNGI FQVRDLRDHL PKGPFGEAGQ DRWRSHMIYE GVARASSLSR MSNCWRSSVT DDPYKVLGVP RTATQNEIRK AYRKRAKELH PDLNPGDQQV ETQFKELSAA YRLLNDPEQR ARFDRGEVDA SGAERPDQRF YRHYADADQA GRYTSTGGSR EFEDISDIFS DLFGGQGRGN FQARGQDLHY QLEVEFLDAV NGARRRITLP DGKTLELAIP AGTRDGSTLR LKGKGAPGIG GAESGDALIA VNVRPHPTFS RNGNDIDVEL PVTLYEAVLG AKIEVPTISG RVAMTVPKGS SSGDVLRLKG KGVKPENGPA GDQHVRLRVV LPEKMDSDLE SFMETWRRTH AYDPREAMRR TL
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