| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5118 |
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| Symbol | |
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| ID | 5319420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 70668 |
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| End bp | 72791 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776896 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_001313828 |
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| Protein GI | 150377233 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.179318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.034812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAACAC CTGAAGAACT CGATCCCGGA TTGTTGAGCA TGTTCACTCA GGAGGTGCGG
GAACGTGCGT CCGAGATGGA GACCGCCGTT CTGGCGATCG AGGAGACGGG CGACGCAGAT
CGGAAGCGGC ATCTGCAGGA GCAGCTCTTA AGAGTGGCAC ATAGCCTCAA GGGTGCCGCC
GGCCTGCTTC AGGTGCGCGG CGTGGAAGCG ATTTGTCACT GGATGGAGGA GATCCTCTCG
ATCGCTGCGA AAGGGAGGTT CGTGCTCGCG AAGCCGCGAC TGGACCTGCT ACTGTCTGCC
GCGGACGCAA TCAGGCACGC GGCCGATCTG CTCGAGAGCG GCGCTGTACC TTCATCCAAC
CATGGAGAGG AAGTCGTCGA GAAGCTGAAG TCCGTCGTGG CCGCAGGCGT TGACGACAAT
ATGCAGAAGC CGCAGCAACA TTCATCCCCG GCAGATCCGG AGATCGCTAT TCGCGTGACC
GACACGGACG GGTCCATGCG CGTATCCGCC GCTCGCCTGG ACGCGCTCCT TTACAGAAGC
GGGGAATTGC TGAGCTTCAA TGCAATCATG CGGCGCCACG CCGAACAGGC CTCCTCGCTG
CGCGACGCAG CAAGAAAATT GCGCGGATCG GGGCCCGATG CTGCCGCGCA GGCGGCGATC
GTCGAAAGCG GGCTGCGTCA GCTGGCGGCA CTGCTCCGGC AAGATGTTCG GCGGATGCAA
AGTGCCGCGG CCGCGCTTGA TGAAGAGGTC AGATATGCCC GTACGCAACC TTTTGATGAG
GCGTGCAAGG GTCTTGGCCG AATCGTTCGC GACGTGGCGG CGGCATCAGG GAAGCGCGCG
GAGCTGGAAA TCCGGGGCGG AGAGATCGAG GTCGATCGAT CCATCCTTTC AGCACTGCAG
GATTCGCTTC GACATCTCGT CCGCAACGCC GTCGCCCATG GCATCCAGAC TCCGGAGGAG
CGCCGGGCTG CAGGACGACC CGAAGAGGGC CGAATTCGCG TTTCGGCAGC GATGCGCGGA
AACCGGATTG AGATTCGCGT GGAAGACGAC GGCCGGGGCC TCAATTTGGC TTTATTGGGT
GCGGCTGCGG GCGGAAAAAC CGAAAGCACG CAAGGAGAAA CCGAACTCCT GCGGCGCCTT
TTCGAGCCGG GTGTCTCGAC ATCGGCGACC GTCACCAGTC TGTCCGGGCG CGGAATAGGT
CTCGACATCG TCAAAAGCAA TGTGGAAAAG CTCCGCGGCG CTGTCGATGT GTCGCAGGTC
CCGACCGGCG GTGCTGCGTT CACCCTCACC CTGCCTTTGA CACTTGCGAC ACTGCGTGTG
CTGGAAGTCA TCGCGGGGGG GCATGTGTTC ACCATCGACG CAGCGTCCGT CGAACGGGTC
ATCCGGGTCA ACCGACAGGA CATCGCGCTA CTGGAGGGTA GGCACTCCGT CAGCACCTCC
ACCGGTCCGA TACCCGTCCT CGATCTTTCA TTTTGGCTCC GCCTCCAGCC GAACCGCGGC
GATCCCAGGC GAACCGTGCC GGCAGTGGTC GTGGCCTCGT CAAGCGGTCC CACTGCGGTG
CTCGTCGACG AAATCGCCGG CGAACAGGAG TTGCTCTTAC GATCGCTCGG TCCACGCCTG
GCAAATGTCA GGCGTTACAG CGGTGGCATG GTGCTTCCGG ACGGGCGCAT CGCCCTTCTT
TTGAACGTCG CAGCGCTCGC CGAGGCTGCG GCCAAGCCCC AGCCTCGCGA TGACATCGCC
GGCCGAAGCG CCAAGGCTGC GCGGCGGAAG GTGCTCGTCG TCGATGATTC CAAATATGTA
CGAACGTTGG TGAAGCTAAT ATTGGAAGGA GCCGGTTACG AAGTGACGAT GGCGAGCGAC
GGTACGGAGG CACTGGAGCA GCTTCGCGAA TGCGGGGCCG ACGTGGTTGT CGCCGACGTC
GACATGCCGT CGATGGATGG GTTCGAGCTC ACGCGGGCCA TTCGCCAGTC GGACCACCTG
ACCCGCACGC CCGTCGTACT GGTAACCGGC CGGGAATCCG TTGAAGACAA GGTGAAAGGA
CTGCGTGCCG GGGCGAACGC ATATCTGAGG AAGGATCAGT TCGATGCGCA CCACTTCCTC
GAAACGATGC GGCAGGTCGT TTGA
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| Protein sequence | MITPEELDPG LLSMFTQEVR ERASEMETAV LAIEETGDAD RKRHLQEQLL RVAHSLKGAA
GLLQVRGVEA ICHWMEEILS IAAKGRFVLA KPRLDLLLSA ADAIRHAADL LESGAVPSSN
HGEEVVEKLK SVVAAGVDDN MQKPQQHSSP ADPEIAIRVT DTDGSMRVSA ARLDALLYRS
GELLSFNAIM RRHAEQASSL RDAARKLRGS GPDAAAQAAI VESGLRQLAA LLRQDVRRMQ
SAAAALDEEV RYARTQPFDE ACKGLGRIVR DVAAASGKRA ELEIRGGEIE VDRSILSALQ
DSLRHLVRNA VAHGIQTPEE RRAAGRPEEG RIRVSAAMRG NRIEIRVEDD GRGLNLALLG
AAAGGKTEST QGETELLRRL FEPGVSTSAT VTSLSGRGIG LDIVKSNVEK LRGAVDVSQV
PTGGAAFTLT LPLTLATLRV LEVIAGGHVF TIDAASVERV IRVNRQDIAL LEGRHSVSTS
TGPIPVLDLS FWLRLQPNRG DPRRTVPAVV VASSSGPTAV LVDEIAGEQE LLLRSLGPRL
ANVRRYSGGM VLPDGRIALL LNVAALAEAA AKPQPRDDIA GRSAKAARRK VLVVDDSKYV
RTLVKLILEG AGYEVTMASD GTEALEQLRE CGADVVVADV DMPSMDGFEL TRAIRQSDHL
TRTPVVLVTG RESVEDKVKG LRAGANAYLR KDQFDAHHFL ETMRQVV
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