| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5090 |
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| Symbol | |
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| ID | 5319392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 39301 |
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| End bp | 40158 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776869 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001313801 |
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| Protein GI | 150377206 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGCC CGCTCGACCT TCGCCTGCTG ATCACCTTCG TACATGCCGC CCACTCCGGA
TCGCTGAGCG CGACGGCAGT GCAGGTCGGG CGTACGCAAT CGGCGGTCAC GATGCAGATG
CAGCGGCTCG AGGAAATGCT TGGCCACAGC CTGCTGCACC GCAGCGGGAG TGGGGTTCGG
CTGACCGGCA GCGGCGAGCG CTTTCTCGTT TATGCCGAGC GAATTCTGAA AATGCATGAC
GAGGCGGTGT CGGCCTTTTC CGATAAGGGC CTGCACGGCT CCATGGTCTT CGGCAGCCCG
GAAGACTATC TGATATCCTT CTTCCCGATG CTTCTGAGAA GCTTCGGTTC GAAATATCCC
GACGTCGAAA TCAAGGTCGT TTCCGCGCCG ACGGTGGAAT TGCGAACGCT CCTTCAATCG
CGCAAGGTCG ATCTGGCGCT TGTTTCGACC CCCAATCTGA ACGACGTCGA AAACATCGTC
AGAACCGAAC CGCTCGTCTG GGTCGGAAGC AAGCCGACGC TGGAACTGCA CGATTTCGGC
GACGCGGTTC CCCTGGCATT GCCGGCCTCG AACGCCATGG ACCATCGCGC GGCATTGCAG
GCGATGGGCG GCGCCGGCCT TCGCTACAAG ATAGCCTATG CAAGCAACAG TCTCGCAGGT
CTGATCGGCC TTGCCCGTTC CGGGCTCGCC ATCAGCGTCA TGACGCAGGA AGCCGTTCCG
CCGGACCTAC ACGTTCTGAA CGCGCCGCTT CCCCAACTGC CGCACCTGGG CATAATGATC
GCCTGCGCGG ACGCCGACCA ATCTCCCGCC GTCGCAGCCT TTGCCGATCA CATCCGGTCG
GTCCTGCCGT CGCTTTAG
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| Protein sequence | MLGPLDLRLL ITFVHAAHSG SLSATAVQVG RTQSAVTMQM QRLEEMLGHS LLHRSGSGVR
LTGSGERFLV YAERILKMHD EAVSAFSDKG LHGSMVFGSP EDYLISFFPM LLRSFGSKYP
DVEIKVVSAP TVELRTLLQS RKVDLALVST PNLNDVENIV RTEPLVWVGS KPTLELHDFG
DAVPLALPAS NAMDHRAALQ AMGGAGLRYK IAYASNSLAG LIGLARSGLA ISVMTQEAVP
PDLHVLNAPL PQLPHLGIMI ACADADQSPA VAAFADHIRS VLPSL
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