| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5067 |
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| Symbol | |
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| ID | 5319369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 13381 |
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| End bp | 14868 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776847 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001313779 |
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| Protein GI | 150377184 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.68424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA AGATCCGGAG AATGACTGCC GGCGTTGCGA TGCTGCTGGC ATCCACACTT
GCCTCTTCGC CCGCATGGGC CCAATCCATC ACCATCGCCA TCGGGTCGGA GCCTTCGACG
CTCGACCCGC AGCTCAGGGA TGACGGCGGC GAGCGGCAGG TCAACGACAA CATCTATGAG
ACGCTGATGG CACGGACGCC GACCGGCGAA CTCGTGCCGG GCCTTGCCGC GGAGGCTCCA
AAACAGGTCG ATGCCACGAC CTGGCAGTTC AAATTGCGGG AGGGCGTCAA GTTCCACAAC
GGCGAACCCT TCAATGCCGA TGCAGTGGTC GCTTCCGTCG CGCGTGTAAT TGATCCCGCG
AACAATTCCG AGCAGATGGC GTATTTCGGC ACGATCAAGG CGGCCGAAAA GGTCGATGAC
CTGACCGTCA ACCTTGTCAC GACAGGCCCG GATCCGATCC TGCCTTCGCG CATGTACTGG
ATGAAGATGA TCGCGCCGGG CTATTCCAAG GACGGCGATC TTGCCGGTGC GCCGGTCGGG
ACAGGCCCTT ACAAGTTCGA AAGCTGGAAC CGGGGCACGG ACCTGAAGCT CGTCGCGAAC
AGCGAATACT GGGGAGGGGA ACCGCAGATC GACGACGTCA CTTACCGCTT CGTGACGGAG
CCGGGCACGC GCCTTTCCGG ACTGCTTTCC GGCGAATTCG ACGTGATTAC GAACCTTCTG
CCGGAGTTCA CGACGAATGT GCCGAAGTTC GCCGCCGTTC CTGGCCTCGA GACATCCGTC
TTCGTTCTGG GCACGGACAA TGAGGTAACG AAAGACCCCA AGGTACGCGA GGCGCTCAAC
CTCGCCATCG ACCGCAAGGC CATGGTCGAG GGCCTTTTCA TGGGTTACGC GACGATCGCC
AAAGGGTCGC ATATCAATCC GGCCGCCTTT GGCTTCAACG AAAAGCTGGA GCATTATCCC
TACGACATCG AGAAGGCGCG GGCGCTGATC AAGGAGGCAG GCGCCGAGGG CAAGCCTCTC
GTCGTCGTCG GCGAATCCGG CCGCTGGCTG AAGGACCGTG AGCAGATCGA GGCAGTTGCG
GGTTACTGGG CCGAGACCGG ACTGAACGTC ACGACCGACA TACAGGAGTT CTCGCAATAT
CTCGACAGCC TGATGGGCGA CGGGCCCCGT CCCGACGCGA TCTTCATCGC CAATTCCAAC
GAGCTGCTCG ATGCCGACCG GGAAATGTCC TTCATCTACC ACAAGGACGG TGCTGCGGCC
TCGAATTCGG ACGCCGAGAT GGCCACCTTG ATCGAGGCGG CGCGCCTCGA AACGGATACG
GCCAAACGCA AGGCGCTTTA CGACGAGATC CAGAAGAAGG GGCATGACCT GAACTACACG
GTGCCGCTGT TTAATCTTCA GGACATCTAC GGAATGTCGG AACGAATGGA ATGGCAGCCA
CGTGTCGACG CGAAGATGAT GGTGAGCGAA ATGAAGGTCA CCGAATAG
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| Protein sequence | MKKKIRRMTA GVAMLLASTL ASSPAWAQSI TIAIGSEPST LDPQLRDDGG ERQVNDNIYE
TLMARTPTGE LVPGLAAEAP KQVDATTWQF KLREGVKFHN GEPFNADAVV ASVARVIDPA
NNSEQMAYFG TIKAAEKVDD LTVNLVTTGP DPILPSRMYW MKMIAPGYSK DGDLAGAPVG
TGPYKFESWN RGTDLKLVAN SEYWGGEPQI DDVTYRFVTE PGTRLSGLLS GEFDVITNLL
PEFTTNVPKF AAVPGLETSV FVLGTDNEVT KDPKVREALN LAIDRKAMVE GLFMGYATIA
KGSHINPAAF GFNEKLEHYP YDIEKARALI KEAGAEGKPL VVVGESGRWL KDREQIEAVA
GYWAETGLNV TTDIQEFSQY LDSLMGDGPR PDAIFIANSN ELLDADREMS FIYHKDGAAA
SNSDAEMATL IEAARLETDT AKRKALYDEI QKKGHDLNYT VPLFNLQDIY GMSERMEWQP
RVDAKMMVSE MKVTE
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