| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4945 |
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| Symbol | |
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| ID | 5318272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1457081 |
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| End bp | 1458349 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776728 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001313660 |
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| Protein GI | 150377064 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.330229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCGA ACAGACTACC AGGGGCATCC GCTGGTTCCC GCATGGCTTC CTGTTTAACC
CGCCTGGTGC TCATGGCGGC TCTCGCCGCT TCCGCGACAT CGCTGGCGCG CGCCGACGAA
TATCGGCTCG GCGTTATGGA CAAACTCCGG GTTCGCGTCG CCGAGTGGCA GACCGCCGAA
GGTGCGGTCC GCGATTGGTC CGCCGTCAGC GGCGATTATA CGGTTGGTGC ATCGGGAAGC
ATTTCCCTGC CTTTCGTCGG CGAACTGCCT GCCTCAGGCA AGACGACAGC CGAAGTGGCC
GAAGAGATCG GCGTAAAGAT GCAGAAGCTC TTCGGTCTCA GGGATCGGCC CTCCGCATCG
GTGGAGATGG CGCAATATCG ACCGGTCTAT CTCTCCGGAG AGGTTCAGAC GCCTGGCGAA
TATCCTTACG CTCCCAACAT GACGGTCCTG AAGGCCGTCA GTCTCGGGGG AGGGCTGCGG
CGGGCCGACA ACGGCCAGCG GTTTGCACGC GACTACATCA ATGCGAGCGG GGAATCGGCT
GTACAGGTTG CGGAACGCAG CCGTCTCCTC ATTCGCCGAG CGCGCCTGCA GGCCGAAATC
GGCAAGCGTG ACTCGATCGG GATGCCCGAG GAGCTCAAGA ATGTACCGGG TGCCGACGAA
CTGCTCGCCA GCGAAACCGC CCTTATGGAA TCGCGCGACA AGCGCCAGAA GCGTCAGCTC
GATGCTCTCG CCGATCTGAG GTCCCTTCTT CAAAGCGAGA TCGAAGCGCT CGCAAAGAAG
GCTGAAACGC AGGCGCGCCA ATTGGAGCTT GCCACCGAGG ATCGCGACAA GGTCGACAGC
CTTGCCGAGA AAGGGCTTGC GCTGAGTCAG CGCAAGCTTT CCCTCGAGCA ACGGGTGGCG
GACGTGCAGG CCTCCCTGCT GGATATCGAC ACCGCATCGC TGAAAGCGAA ACAGGATGCG
AGCAAGGCGG CGCAGGACGA AACGAATCTG CGCAACGACT GGGATGCGCA ACTTGCGCAG
GAACTGCAGA ACACCGAAGC CGAACTCGAT ACGCTGGCCT TGAAGCTCGG CACCAGCCGG
GATCTCATGA CAGAGGCGCT GCTGCAGTCG GCGGACGCGG CCCAGCTCGA ACAGCAGGCA
GCCCAGATCA CCTATTCCAT CATTCGCGAC AAGGATGGGA AGCCGACCGA GATCGCGGCC
GATGAGAACA CCCCAGTGCT GCCTGGGGAC GTCATCAAAG TGAATACGGC ATTGGCGGCG
ATGCGGTGA
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| Protein sequence | MQSNRLPGAS AGSRMASCLT RLVLMAALAA SATSLARADE YRLGVMDKLR VRVAEWQTAE
GAVRDWSAVS GDYTVGASGS ISLPFVGELP ASGKTTAEVA EEIGVKMQKL FGLRDRPSAS
VEMAQYRPVY LSGEVQTPGE YPYAPNMTVL KAVSLGGGLR RADNGQRFAR DYINASGESA
VQVAERSRLL IRRARLQAEI GKRDSIGMPE ELKNVPGADE LLASETALME SRDKRQKRQL
DALADLRSLL QSEIEALAKK AETQARQLEL ATEDRDKVDS LAEKGLALSQ RKLSLEQRVA
DVQASLLDID TASLKAKQDA SKAAQDETNL RNDWDAQLAQ ELQNTEAELD TLALKLGTSR
DLMTEALLQS ADAAQLEQQA AQITYSIIRD KDGKPTEIAA DENTPVLPGD VIKVNTALAA
MR
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