| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4941 |
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| Symbol | |
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| ID | 5318268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1451368 |
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| End bp | 1453182 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776724 |
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| Product | ABC transporter related |
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| Protein accession | YP_001313656 |
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| Protein GI | 150377060 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.690923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.361162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTCA CCCGTTTCAC GGCGCGCAAC CGCGCCTTTC TCAGCGTTTT CCGATTCTCC
TGGGCACATT GGAAGAGGCA ACCGGTGCGG CTGGCCGCTC TTCTGACCGC GGTGCTGTTT
TCGACGCTTG CCGATGTGCT CACGCCGCTA TATTCCGGCC GGCTGGTCGA TGCCGTGGTT
TCCGGGGCGG CCAGTGACGA GATCGCCTGG AATGCGGCAA TGGCGGCCTT CATGATGTTG
ATGGCCTTGT CGCTTGGCGC GATCGTGCTC AGGCACGTGA CCTTCATGGG GATCGTCAGC
CTGACGCTGA AGATGATGTC CGACATCGCG GCAGCAGCCT TCCATCACAT CCAGCGGTTT
TCCAGTGACT GGCACGCCAA CAGCTTCGCC GGCTCGACGG TCCGCAAAGT GACGCGCGGC
ATGTGGGCGC TCGATCTGTT GAACGACACG CTCCTCGTGG CGCTTTTCCC GTCCGTGGTC
ATGCTGGTCG GTTCCACGGC GCTGATGGCC TGGTACTGGC CGATGATGGG GGTGATCATC
GGTCTCGGCT CGATCGTCTT TATCGTCGTC ACCGTTTCCC TGTCGCTCGG CTATGTGGCG
CCGATGGCGA GCCTTGCCAA TAGCTGGGAC ACCCGGCTCG GCGGCGCGCT TGCCGATGCG
GTCAGCTGCA ACCCCGTCGT GAAGGCTTTC GGAGCGGAGG GACGCGAAGA CGCGCGCCTC
GCCAAGGTTC TGCGCAAATG GGAGAACCGG ACCCGGCGCA CCTGGTCGCG CGGTACGCTC
AACGGCACCG CACAGGGTGC AATGCTGCTG GTTCTGCGTG CCGCGGTGAT CGGCTTCGCT
CTCCTTCTCT GGGCCAGAGG GCAGGCGACC GCAGGCGATA TCACCTTCGT GCTGACCTCA
TTCTTCATCC TGCAGGGCTA TCTGCGCGAA GTGGGCATGC ATATCCGCAA CCTGCAGCGC
TCGATCAACG ACATGGAGGA ACTCGTCGCC ATTCACGATC AGTCGCTCGG CGTGGAGGAC
CGCCCCGGCG CAAAGCCCAT CCGCATCACC GAAGGCGGGA TTGAGTTCCG CGACGTGACC
TTTCACTACG GAGCGCATCG TGCACCACTT TACCAGGGCT TCTCGGTAAG CATAGCGGCG
GGCGAACGCG TCGGTCTCGT CGGGCATTCC GGCTCGGGCA AGACGACGTT CATCAAGCTG
ATCCAGCGTC TCCACGATCT GAATGCCGGT GAGATCCGCA TCGACGGGCA GAACATCGCC
GACTTCACGC AGGCGTCGCT GCGCCAGCAG ATCGCCATCG TGCAGCAGGA GCCGATTCTG
TTTCACCGCT CGCTTGCCGA GAATATCGCC TATGCACGGC CGGGAGCGAC GCAGCGTGAC
ATCGAGGAAG CGGCGAGGCT TGCGAGCGCT CATGATTTCA TCACCGAATT GCCGAAAGGC
TACGCCACGC TCGTCGGCGA ACGCGGGGTG AAGCTTTCCG GCGGCGAGCG CCAGCGCGTG
GCGATCGCTC GTGCATTTCT GGCGGATGCG CCGATCCTCA TCCTCGATGA GGCGACGTCG
AGCCTCGATT CGGAGTCTGA GGTGCTGATC CAGCAGGCGA TGGAGCGGCT GATGACGGGG
CGCACGACGC TGGTGGTCGC ACACCGTCTT TCGACGGTGC GCGCGCTTGA CCGGCTACTG
GTGTTCGATC GCGGCCGCAT TGCGGAAGAA GGCGACCACG GCGCGCTCAT CCGCGTCAAG
GGCGGCATCT ATCGCAGTCT GTTTGAGCGG CAGGCGCTGG AACTGACGAA GGGCCTCATC
CTCAGCGAGG GATGA
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| Protein sequence | MAFTRFTARN RAFLSVFRFS WAHWKRQPVR LAALLTAVLF STLADVLTPL YSGRLVDAVV
SGAASDEIAW NAAMAAFMML MALSLGAIVL RHVTFMGIVS LTLKMMSDIA AAAFHHIQRF
SSDWHANSFA GSTVRKVTRG MWALDLLNDT LLVALFPSVV MLVGSTALMA WYWPMMGVII
GLGSIVFIVV TVSLSLGYVA PMASLANSWD TRLGGALADA VSCNPVVKAF GAEGREDARL
AKVLRKWENR TRRTWSRGTL NGTAQGAMLL VLRAAVIGFA LLLWARGQAT AGDITFVLTS
FFILQGYLRE VGMHIRNLQR SINDMEELVA IHDQSLGVED RPGAKPIRIT EGGIEFRDVT
FHYGAHRAPL YQGFSVSIAA GERVGLVGHS GSGKTTFIKL IQRLHDLNAG EIRIDGQNIA
DFTQASLRQQ IAIVQQEPIL FHRSLAENIA YARPGATQRD IEEAARLASA HDFITELPKG
YATLVGERGV KLSGGERQRV AIARAFLADA PILILDEATS SLDSESEVLI QQAMERLMTG
RTTLVVAHRL STVRALDRLL VFDRGRIAEE GDHGALIRVK GGIYRSLFER QALELTKGLI
LSEG
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