Gene Smed_4890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4890 
Symbol 
ID5318228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1400522 
End bp1401505 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content59% 
IMG OID640776675 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001313607 
Protein GI150377011 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.480972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATGA AGATCATCGT TTTTGCCGCA GCATCCCTGA CGATGGGGCT CACTGCCACC 
GCCCTCGCCG AGGAACTTCA ACCGGAAGCG ATAAACACTG CTCCGATCGC GTCCATTGCA
CCGGAACGGC CGCCGAAGGA ATCGCCTCAC CCGGATCCCG CCATCGTCCA TCTCCAGGTT
CTTCTGGATA GGGCGGGCTC GTCTCCCGGA GTGATAGACG GCTACTATGG CGAGAACGTC
ACTAAGGCGA TTGCCGGTTT CGAGGCCATG CAGAAGCTTC CCACCGATGG GAAGTTGGAT
CCCGAGGTGG TGAGCCGGCT TTCGGAGGAC AAGCCCGCTA TACAATCCTA TGTCATCACC
GAAGAGGACA CCAAGGATCT CGTCTCTGAC ATTCCCAACG ATTACTCTGA ACAAGCGGAA
ATGGACAATC TCGGATATAA GAGCGTCGAA GAGAGACTGT CCGAGCGCTT TCACATGGAC
GTCGACCTCC TCAAGACTTT GAACCCGAAT TCGTCGTTCG ATACCGGAGA AACGGTGTGG
GTTGCGATGC CCGGCGCTCC GAAGGAGGGC GTGGTCAAGA GGATAGAAGT GCGCAAACGA
TCGGGCCAGG TCCTGGCATT CGCCGAAGAC GGTGCGCCGA TCGCCGTGTA TCCCGCCTCC
ATCGGCAGCG AAGCGTCACC CTCGCCGAGC GGCAGACACA AGGTAAAAGG CGTCGCTCGG
ATGCCCCCAT ACGTCTACGA TCCGGAAGTC AACTTCCAGC AGGCCGACAA CAACAAGCCC
CTGACGCTGC CCAAAGGTCC GAACAATCCG GTTGGAACCG TGTGGATCGA TCTGACGAAG
CCTACCTACG GCATTCACGG CACGCCCGAG CCGTCCCTCA TCGACAAGGC TCAGTCGCAC
GGATGCGTCC GCCTGACCAA CTGGGACGCA GAGGAACTTG CCGAGATGGT CAAACCGGGG
GTGATCACCG AGTTCACGGA CTGA
 
Protein sequence
MFMKIIVFAA ASLTMGLTAT ALAEELQPEA INTAPIASIA PERPPKESPH PDPAIVHLQV 
LLDRAGSSPG VIDGYYGENV TKAIAGFEAM QKLPTDGKLD PEVVSRLSED KPAIQSYVIT
EEDTKDLVSD IPNDYSEQAE MDNLGYKSVE ERLSERFHMD VDLLKTLNPN SSFDTGETVW
VAMPGAPKEG VVKRIEVRKR SGQVLAFAED GAPIAVYPAS IGSEASPSPS GRHKVKGVAR
MPPYVYDPEV NFQQADNNKP LTLPKGPNNP VGTVWIDLTK PTYGIHGTPE PSLIDKAQSH
GCVRLTNWDA EELAEMVKPG VITEFTD