| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4888 |
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| Symbol | |
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| ID | 5318050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1398593 |
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| End bp | 1399222 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640776673 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001313605 |
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| Protein GI | 150377009 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATA GTGGTTGGCG TGGTTCACCG GATGTTTGGC TCGGGGCGGC TTACGAGTCT
CTTCTGGAGG CGGGTGTCGA TGCGGTGAAG ATCCAGCCGC TGGCAAAGAA GCTCAATCTT
TCGCGGACAA GCTTCTACTG GTTCTTCAAA GACCGGGAAG AATTGCTCGA TGCGCTCGTC
ATACGATGGC GTGAGAAAAA CACCGGCAAT CTCATCAAGC AGGCCGAAGC TTACGCCGAG
ACGGTCGCCG AGGCGATGCT GAACGTTTTC GATTGCTGGC TGGATAGCAG CCTGTTCGAC
TCGCAGTTCG AGTTTGCCGT GAGAAGCTGG GCCATTCAGT CGCCCGAAAT ACTCGCAGAG
GTCCAGAGAG CAGATCAGCA GCGGCTTGAG GCACTCACGC GCATGTTCCT GCGATTTGGG
CAGAACGAGG CCCGAGCCGA TGTGCGCGCG CGCACGATCT ATCTCGTACA GATCGGCTAC
ATTTCTATGC AGACGAAGGA GGACACCACC GTCCGCATGA AGCGCATCCC GGAATATGTG
GAAATCTTCA CTGGACAAGC GCCGGAGCAG AGAGAGCTCG ACCGCTTTTT CGCCAGGCAT
GGCTACTCGG ACAGCAAAAA AGGCGCTTGA
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| Protein sequence | MNDSGWRGSP DVWLGAAYES LLEAGVDAVK IQPLAKKLNL SRTSFYWFFK DREELLDALV
IRWREKNTGN LIKQAEAYAE TVAEAMLNVF DCWLDSSLFD SQFEFAVRSW AIQSPEILAE
VQRADQQRLE ALTRMFLRFG QNEARADVRA RTIYLVQIGY ISMQTKEDTT VRMKRIPEYV
EIFTGQAPEQ RELDRFFARH GYSDSKKGA
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